Pedobacter steynii: BFS30_01020
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Entry
BFS30_01020 CDS
T04469
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
psty
Pedobacter steynii
Pathway
psty03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BFS30_01020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psty03400
]
BFS30_01020
Enzymes [BR:
psty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BFS30_01020
DNA repair and recombination proteins [BR:
psty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BFS30_01020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
Cas3-like_C_2
DUF1015
nSTAND3
Zot
Zn_ribbon_6
AAA_30
TrmB
HypA
TackOD1
Motif
Other DBs
NCBI-ProteinID:
AOM75874
UniProt:
A0A1D7QBC6
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All DBs
Position
complement(232105..234585)
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AA seq
826 aa
AA seq
DB search
MMDSDQLEFEERETLFIEVILPLSLAKNYIYRVPFDLNAQVAIGKRVVVQFGKNKIYTAL
IKSISKNAPEVYQAKYIIDVVDEHPVITTSQLEFWDWMTGYYLCNEGEVMSAALPAGLKL
ASETIIVLKEEFPQDGEVLTAKQEVLINALKIHNRLTIDQVSALLGQKTVYPIINTLLDK
EMVYIAEEVVEKYKPLLKSFVSLHAFYHEEENLRQLFSVLERAPKQMNALLTFLKLSKQQ
SVIPKQQLLEESDCGQAALKTLVEKEIFVIDKKPVSRLKEQDDDFVLNFELSETQAGALT
QIETEFEQKDVVLLHGVTASGKTQVYIKLIEKAIEKGGQVLFLLPEIALTTQIVERIQRY
FGDAIGVYHSKFNNNERVEIWNKVLNGKYRIVLGARSAVFLPFQDLKLIVVDEEHESSYK
QQEPAPRYQARDAAVYLAWLHKAKVVLGSATPSIESYFNALHQKYGLVTMTERFGGVELP
VQEVISIAEETKKKKMVSYFSNKLVDEIEATLQVKEQVILFQNRRGYATILICATCGYAP
KCVNCDVSLTYHKTSGKLHCHYCGYHQNSINICPACGSVHIEQKGFGTERVEEELSLIFP
DAKIARLDVDSTRTRNGLQQIISDFQEKKTDILIGTQMVAKGLDFDNVTLIGVINADTLL
NYPDFRAFERSYQLLAQVAGRAGRRDKQGKVVIQAYDDKHRIIGQVIENKYQEMYTDEIR
ERREFHYPPFTRMIFVNIKHKDMNLLNVAAQQFATALRTQLGNRVLGPEQPMVGRIRNYY
IKQIIIKSDKNTAITKVKSVLKEVILEFQSQKDYRSAIVQVDVDPY
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgatggattctgatcaattggaattcgaagaacgggaaaccctgttcatagaagtcatc
ctgccattatccctggccaaaaattacatttaccgggttccgtttgacctgaatgcgcaa
gtggccattggaaaacgtgtcgtggtacaattcgggaaaaacaaaatttataccgcttta
atcaagagcatcagtaaaaatgcccctgaggtgtatcaggcaaaatatatcattgatgtg
gtggatgaacatccggtcattaccacttctcagctggagttctgggactggatgacgggc
tattacctttgtaatgaaggcgaagtcatgtcggccgccttacctgcgggcttaaaactg
gccagcgagaccatcatcgtccttaaagaagagtttcctcaggatggagaagtcttaact
gcaaaacaggaagtgctgatcaatgctttaaaaattcacaaccggctgacgatagatcag
gtttcggctttgttagggcagaagaccgtctatccgatcatcaataccctgctcgataag
gaaatggtttacatcgccgaggaagtggtggagaaatataagccgctgctgaaatcgttt
gtcagcctgcatgctttttatcacgaagaagaaaacctgagacaattgttttcggtatta
gagcgggctcctaaacagatgaatgctttgcttacctttttaaagctttctaagcaacaa
agtgtaattcctaagcagcaactgctggaggaaagtgattgtggtcaggctgcgcttaaa
acacttgtggagaaagagatttttgtaattgataagaagccggtgagcaggttgaaggag
caggatgatgatttcgtgctgaactttgaactgagcgagacacaagccggtgcattgaca
caaattgagacagaattcgaacagaaagatgtggttttactacatggggtaactgcttca
ggtaaaacacaggtttatataaaactgattgaaaaagcaattgaaaaaggtggacaagtc
cttttcctgttgccggagattgcgctgactacacagattgtagagcgtatccaacgttat
ttcggagatgcgattggtgtgtatcattctaagttcaataacaatgaaagggtagagatc
tggaataaagtgctgaatggaaaataccgcattgttttgggtgcacggtcggcagtcttt
ctgcctttccaggatctgaaactaattgtggttgatgaggaacatgaatcttcgtataaa
caacaggagccggcaccacgttaccaggccagagatgcagcggtatacctcgcctggtta
cataaggcgaaagttgtgctgggttctgccacaccttcaattgaaagttattttaatgcc
ctgcatcagaagtacggattggtgaccatgactgaaaggtttggcggggttgagcttcct
gttcaggaggtcatcagtattgcagaagaaaccaaaaagaaaaagatggtttcttatttc
tccaataaactggttgatgaaattgaggcgaccttacaagtcaaagagcaggtcatctta
tttcagaacaggaggggttatgcaaccattctcatttgtgccacctgtggttatgcaccc
aaatgtgtgaactgtgatgtgagccttacttaccataaaacaagcggaaagctgcattgt
cattattgcggttatcatcagaacagcattaacatttgtccggcatgtggttctgttcat
attgaacagaaaggctttggaacagagcgggtggaagaggagctgagcctgatttttccg
gatgctaaaattgcccgtttagatgtagacagcacgagaacaagaaatggactgcagcag
attatttcggatttccaggagaagaagacagatatcctgatcggaacgcagatggttgca
aaagggttggattttgataatgtgacccttatcggtgtgatcaacgctgataccctttta
aattatccggatttccgcgcttttgagaggagttatcagctgctggcgcaggtagccggc
agagctggccggagggataagcagggaaaggtagttatccaggcctatgacgataaacac
cggatcatcggacaggtaattgaaaataaataccaggagatgtatacggatgaaatcagg
gaaagaagggagtttcattacccaccatttacccgtatgatctttgtcaatattaaacat
aaagatatgaacctgctcaatgttgctgctcagcagtttgctactgcattgagaacacag
ttgggaaaccgggtgttgggaccggagcagcctatggttggccggatccggaattattac
atcaaacagatcatcatcaagagtgataaaaatacagccattacaaaagtaaaatctgta
ctgaaggaggtgatcctggaattccaatcccaaaaagactatagaagtgctatcgttcag
gtagatgtggatccatactag
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