KEGG   Pedobacter steynii: BFS30_01460
Entry
BFS30_01460       CDS       T04469                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty  Pedobacter steynii
Pathway
psty02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psty00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BFS30_01460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psty03021]
    BFS30_01460
Transcription machinery [BR:psty03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BFS30_01460
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 HTH_24 Sigma70_ECF HTH_11 HTH_Mga HTH_DeoR ADSL_C
Other DBs
NCBI-ProteinID: AOM80572
UniProt: A0A1D7QPI3
LinkDB
Position
complement(335683..336255)
AA seq 190 aa
MRLYSNLSDVELVDLLKSGNQLAYTEIFERYTRVLLRHAFRLLSDHEEAHDVVQDVFLQL
WQKREDLSFKTSLSAYLYASVRNKIFNLLSHQKVILRYAESISSFMVEGYNIIEDQIREK
ELALIIEKEVDALPPKMREVFLLNKKDELNYREISERLNISSETAKQQVYKAMKILKLKI
DSFLSIYPFL
NT seq 573 nt   +upstreamnt  +downstreamnt
atgagattatatagtaatctttcggatgtggagctggtagacttactaaagtcagggaac
cagctcgcgtatactgaaatctttgaacggtataccagagtgctgctgcggcatgcattt
cggcttctttccgatcatgaagaagcccatgatgtggtgcaggatgtgtttcttcagctt
tggcaaaaacgggaagacctatcatttaaaacctcactttctgcatatctctatgcttcc
gttagaaacaagatttttaatttactatctcatcagaaggtgattttaagatatgcagaa
tccattagcagttttatggtagaaggctataacatcattgaagatcagatcagggaaaag
gaactcgctttgatcatagaaaaagaggtggacgctctacctccaaaaatgcgggaggtg
tttctcttaaataaaaaagacgagctaaattaccgtgaaatatcggaaagactgaatatc
agcagtgagacagcaaaacaacaggtttataaagcaatgaaaatcctgaagcttaaaata
gactccttcctgagtatttatccttttctgtag

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