Pedobacter steynii: BFS30_01460
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Entry
BFS30_01460 CDS
T04469
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty
Pedobacter steynii
Pathway
psty02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BFS30_01460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psty03021
]
BFS30_01460
Transcription machinery [BR:
psty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFS30_01460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_24
Sigma70_ECF
HTH_11
HTH_Mga
HTH_DeoR
ADSL_C
Motif
Other DBs
NCBI-ProteinID:
AOM80572
UniProt:
A0A1D7QPI3
LinkDB
All DBs
Position
complement(335683..336255)
Genome browser
AA seq
190 aa
AA seq
DB search
MRLYSNLSDVELVDLLKSGNQLAYTEIFERYTRVLLRHAFRLLSDHEEAHDVVQDVFLQL
WQKREDLSFKTSLSAYLYASVRNKIFNLLSHQKVILRYAESISSFMVEGYNIIEDQIREK
ELALIIEKEVDALPPKMREVFLLNKKDELNYREISERLNISSETAKQQVYKAMKILKLKI
DSFLSIYPFL
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagattatatagtaatctttcggatgtggagctggtagacttactaaagtcagggaac
cagctcgcgtatactgaaatctttgaacggtataccagagtgctgctgcggcatgcattt
cggcttctttccgatcatgaagaagcccatgatgtggtgcaggatgtgtttcttcagctt
tggcaaaaacgggaagacctatcatttaaaacctcactttctgcatatctctatgcttcc
gttagaaacaagatttttaatttactatctcatcagaaggtgattttaagatatgcagaa
tccattagcagttttatggtagaaggctataacatcattgaagatcagatcagggaaaag
gaactcgctttgatcatagaaaaagaggtggacgctctacctccaaaaatgcgggaggtg
tttctcttaaataaaaaagacgagctaaattaccgtgaaatatcggaaagactgaatatc
agcagtgagacagcaaaacaacaggtttataaagcaatgaaaatcctgaagcttaaaata
gactccttcctgagtatttatccttttctgtag
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