KEGG   Pedobacter steynii: BFS30_01875
Entry
BFS30_01875       CDS       T04469                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty  Pedobacter steynii
Pathway
psty02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psty00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BFS30_01875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psty03021]
    BFS30_01875
Transcription machinery [BR:psty03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BFS30_01875
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 GerE Rota_NSP3 HTH_23 Sigma70_ECF HTH_40 HTH_10 LPD39 HTH_20 HTH_3 KORA
Other DBs
NCBI-ProteinID: AOM76019
UniProt: A0A1D7QBQ3
LinkDB
Position
complement(436827..437420)
AA seq 197 aa
MSAPHTFSDDDLKAKLVAGDDSAFSELYERYSAQVYQYIKKFVHSTDLSEDLTQEIFIKI
WQCKSKLGEVQSIRAYLFIMARNHTLNSLKKAMRSDVAMAEIVNSFVEERNETEEELLSK
EYHEYLERELNALPARTREVFRFCRQQGKSYDEVAMELGISRNAVKNHMVASMKILGASA
KRDLGVSLSVLLTVLLK
NT seq 594 nt   +upstreamnt  +downstreamnt
atgtcagcaccacatactttttccgatgatgatctaaaggctaaattggtagcgggggat
gactctgctttctcagagctttatgaacggtatagtgcgcaggtttatcaatacattaaa
aaatttgtacattctacagacctttcagaagacctgactcaagagatttttataaaaatc
tggcagtgtaaatctaagttaggagaggttcaatccatcagggcctaccttttcattatg
gccagaaaccataccttgaacagtcttaaaaaagcaatgagatcggatgtggcaatggcg
gaaatcgtaaatagctttgtggaagaaagaaatgagacggaggaagagctgctgagtaaa
gaataccatgagtacctggaaagagagttgaatgctttaccagccagaaccagagaagtt
ttccgcttttgccgtcagcaggggaaaagctatgatgaggtagctatggaattgggcatt
tcaagaaatgcagttaaaaatcatatggttgcgtctatgaaaattttgggtgcttctgct
aaaagagatctgggagtgtctctgagtgtgcttttgaccgtcttattaaaataa

DBGET integrated database retrieval system