KEGG   Pedobacter steynii: BFS30_02125
Entry
BFS30_02125       CDS       T04469                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty  Pedobacter steynii
Pathway
psty02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psty00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BFS30_02125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psty03021]
    BFS30_02125
Transcription machinery [BR:psty03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BFS30_02125
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 GerE HTH_Tnp_ISL3 HTH_11 PF0610-like_N Sigma70_ECF HTH_23 HTH_Mga HTH_24 HTH_10 HTH_17 UPF0122 HTH_28 HTH_Tnp_4 HTH_DeoR Radical_SAM_2 HTH_16 HTH_36 DUF7388 DUF2089 HTH_40 NirdL-like_HTH Terminase_5 Sigma70_r3 Xre-like-HTH HTH_AsnC-type
Other DBs
NCBI-ProteinID: AOM76067
UniProt: A0A1D7QBP8
LinkDB
Position
486421..486999
AA seq 192 aa
MLSYSSSTDFELTNLLRKGDNNAFNEIYKRFQGLLYVYACKVIKDKEEAEDIVQEVFLYL
WDKRATINITSTISVYLYTAVRYKFFNLLDRKKVRINYEDSFRQFLEQGEYITDNNIRQK
EFSKLIEQEIDALPDKMREVFVLSRKHYLSRKEIAEQLGISEKTVKNQINHALKILRGKI
DLFTFLLLLFNK
NT seq 579 nt   +upstreamnt  +downstreamnt
atgctttcttatagctcatctacggactttgaattaacaaacctgctcaggaagggtgac
aataatgcattcaatgaaatctataaacggtttcagggattattatatgtatacgcttgc
aaagtaataaaagacaaggaagaagcggaggatatagttcaggaagtatttctctactta
tgggataaaagagccacaataaacatcacatctaccatatccgtctacttatatactgca
gttcgttacaaatttttcaatcttctggaccgtaaaaaagtacgtattaattatgaagac
tctttccgtcaattccttgaacagggagaatatattactgataacaatattcgtcaaaag
gaattcagtaaacttattgagcaggaaattgatgctttaccagataaaatgcgcgaagta
ttcgtacttagccgaaagcattacctatccagaaaggagattgcagagcaattgggaatt
tctgaaaaaactgtaaaaaatcaaattaatcatgcgctaaagatccttagagggaagatt
gacttgtttacttttcttctgttactattcaataaataa

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