Pedobacter steynii: BFS30_02295
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Entry
BFS30_02295 CDS
T04469
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psty
Pedobacter steynii
Pathway
psty03420
Nucleotide excision repair
psty03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BFS30_02295
03430 Mismatch repair
BFS30_02295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psty03400
]
BFS30_02295
Enzymes [BR:
psty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BFS30_02295
DNA repair and recombination proteins [BR:
psty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BFS30_02295
MMR (mismatch excision repair)
Other MMR factors
BFS30_02295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
ResIII
AAA_12
AAA_11
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOM76101
UniProt:
A0A1D7QBP9
LinkDB
All DBs
Position
522978..525287
Genome browser
AA seq
769 aa
AA seq
DB search
MDYLAGLNPQQRAAVENTQGPAMIVAGAGSGKTRVITYRVAHLIEKGVDAFNILVLTFTN
KASKDMRERISKVIGAEAKNIWMGTFHSVFAKILRVEAEKIGYPSNFTIYDTDDSKSLIR
AILREMQLDDKLYNANFVYNRISSAKNNLVSHTEYLENAEIQAEDVSNKRPLIGVIYETY
TKRCFKAGAMDFDDLLFKTNVLLKNHPDVLNKYQQKFKYLMVDEYQDTNFSQYTIVKKLA
AAYQNICVVGDDAQSIYAFRGANIQNILNFERDYPDLKVYKLEQNYRSTQNIVEVANSII
ANNKNQLEKNVFSDNESGDRIKVQRAFTDNEEGKIVAEAIVQERSSKGYNYNDFAILYRT
NAQSRAMEEALRKLNVPYKIYGGLSFYQRKEIKDLIAYFRLTFNPADEEAIKRVINYPKR
GLGDTTVEKILVAADQHDITMWQVICDPQQYIAGRIANQLNDFAVMIQSFAAEAKKLDAY
ETALYIAQHSGILKELHSDTTDEGRGRHENIQELLNGIKEFGEREDIEDRSLAVFMQDIA
LLTNDDKTEDKNKDTVSLMTIHSSKGLEFKNVFVVGLEENLFPSQMSLNSRTDLEEERRL
FYVAVTRAEKKLTLTYATSRYRWGTLTNCEPSRFIDEINARYLEIEVAKPAKSTLNEDSF
SSERRSWTQQRDTFSKPKPASSSTTSSTSTAPRPKTTSMLPKAHVPTPGFAPDAANLFQN
GMEVEHEKFGFGKIVSLEGILPDVKATVFFQGLGNKQLLLKFAKLRIVK
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
ttggattatttagcaggattaaacccccaacaacgcgcagcagtagaaaatacccaggga
ccggcaatgattgtcgcaggtgccggctccggaaaaacacgtgtaattacttatagagta
gctcacctgatagaaaaaggggttgatgcctttaacatcctggtacttacctttaccaac
aaggcctcaaaagatatgcgtgagcgtatctcgaaagtgattggcgctgaagccaagaac
atctggatgggtacttttcactccgtatttgccaagatcttaagggtcgaagccgaaaaa
atcggttacccttctaacttcaccatttacgatactgacgatagtaaaagcctgatcagg
gcgatcctgagagagatgcagctggacgacaagctttataatgccaattttgtttacaac
aggatttcttctgcgaaaaacaatctggtttctcatacagaatacctagagaatgccgaa
attcaggcagaggatgtcagcaataaacggccgttaatcggggtaatttatgaaacttac
accaaacgctgcttcaaagccggagcaatggattttgacgatttgctgttcaaaacaaat
gtattgttaaaaaatcatcctgatgtattgaacaaataccagcagaaattcaaatacctg
atggtagatgagtatcaggataccaacttttcacaatataccatagtaaagaaactggct
gctgcctatcagaatatctgtgtagtaggtgatgatgcacaaagtatttacgccttcagg
ggggcaaacattcagaacatcctgaatttcgaacgtgattatccggacttaaaagtttat
aaattagagcagaactaccgctctacccagaatattgtagaagttgccaacagcattatc
gccaacaataaaaatcagttggaaaagaatgtgttctccgacaatgagtccggcgaccgc
attaaggtacaacgcgctttcacagataatgaagaaggtaaaatcgtagctgaagccatc
gttcaggaacgcagttccaaaggatataactacaatgattttgccattttgtatcgcacc
aatgcccagtcaagggcaatggaggaagctttaaggaagttaaacgtaccttacaaaatt
tatgggggcctctctttctatcaacgtaaagagatcaaggatttaatagcttatttccgg
ttaaccttcaatcctgcagatgaggaagctataaaaagagtaattaattaccctaaaaga
gggcttggagatactacagtagaaaagatcctggttgctgcagatcaacatgacatcacc
atgtggcaggtaatctgtgaccctcagcagtatatcgccgggaggattgccaatcagctg
aatgattttgctgtgatgattcagagttttgcagctgaagcaaaaaaactagatgcctat
gaaacggctttatacattgcccaacattcaggaattttaaaagaattacattcagatact
accgatgaaggtcggggaagacatgaaaatatacaggaattattaaatggtatcaaggaa
ttcggtgaacgtgaagacatcgaagaccggagtcttgcggtattcatgcaggacatcgcc
ttgctgaccaatgatgataagaccgaagacaaaaataaagacaccgtttccttaatgacg
attcactcttctaaaggactggaattcaagaacgtatttgttgtaggcctggaagaaaac
ctcttcccttcacaaatgtcgctgaactccagaacggacctggaagaagagcgcagactg
ttttatgtggccgtaacgcgtgcagaaaagaaactgacgcttacttatgcaacttccaga
tacagatggggtacactcacgaattgcgaaccgagtcgttttatcgatgagatcaatgcc
cgttacctggaaattgaagtggcgaaacctgctaaaagcaccttaaacgaagacagtttc
tcttcagaaagaagaagctggacacaacaaagagatactttcagtaagccgaaaccggca
tcatcatccaccaccagcagtacttctacagcaccgagaccaaaaacaacgtccatgctg
ccaaaagcgcatgttcctacaccgggctttgctcctgatgcagcaaatttattccagaat
ggaatggaagtagagcatgaaaaatttggatttggtaaaattgtgagcctggagggtata
cttccggatgtaaaagcaacggtattttttcagggtctgggtaataagcagttattatta
aaatttgctaaattgcgaattgttaaataa
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