KEGG   Pedobacter steynii: BFS30_02560
Entry
BFS30_02560       CDS       T04469                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty  Pedobacter steynii
Pathway
psty02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psty00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BFS30_02560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psty03021]
    BFS30_02560
Transcription machinery [BR:psty03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BFS30_02560
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 GerE Sigma70_ECF HTH_24 HTH_11 UPF0122 PF0610-like_N HTH_23 HTH_AsnC-type HTH_40 HTH_DeoR HTH_20 HTH_10 HTH_Tnp_ISL3 Xre-like-HTH HTH_Mga COMMD8_HN HTH_17 HTH_29 DUF722 HTH_28 HTH_30 GYF_ATXR3 Phage_terminase YcbB
Other DBs
NCBI-ProteinID: AOM76145
UniProt: A0A1D7QBW6
LinkDB
Position
complement(585975..586553)
AA seq 192 aa
MLNYQTISDHELAGLLKSGDRKAYTEIYNRYKWLLHVHAYKWMQDREEAKDIVHELFASL
WTKRESLSFPENLSAYLYTAVRNRIFNMISHQKVESEYLSSLQHFIDEGTCVTDHLVREK
QLTALIEKEISSLPPKMREVFELSRKSQLSHKEIAEQLQLSEQTVRKHVQHALKILRIKL
GLVVFLIFISHY
NT seq 579 nt   +upstreamnt  +downstreamnt
atgcttaattatcagacaatatcggaccatgaactggccggattgttaaagtccggggat
agaaaagcttacacggaaatttacaacaggtataagtggttattgcatgttcatgcctat
aaatggatgcaggatcgtgaagaggcaaaggacattgttcatgagctttttgccagtctg
tggaccaaacgtgaaagtttgtctttccctgaaaacctttctgcttatttatacaccgcg
gtgcgaaaccgtatttttaacatgatctcccatcaaaaggtggaatctgaatacctcagc
tccctgcaacactttatcgatgaggggacttgtgtaacggatcatctggtcagggaaaaa
cagctgactgcgctgatcgaaaaagaaatctcttccttaccccctaaaatgcgtgaagtt
tttgaactgagcaggaaatcgcagttgagccataaggaaattgcggagcagctacagctc
tctgagcaaaccgtaaggaaacatgtacaacatgccttgaaaatattgaggattaaactc
ggactggtggtatttctgatctttatctcccattattaa

DBGET integrated database retrieval system