Pedobacter steynii: BFS30_02875
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Entry
BFS30_02875 CDS
T04469
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
psty
Pedobacter steynii
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psty02000
]
BFS30_02875
Transporters [BR:
psty02000
]
Other transporters
Pores ion channels [TC:
1
]
BFS30_02875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
Plug
CarboxypepD_reg
Dockerin_1
Big_1
Motif
Other DBs
NCBI-ProteinID:
AOM76199
UniProt:
A0A1D7QCC0
LinkDB
All DBs
Position
complement(676804..679881)
Genome browser
AA seq
1025 aa
AA seq
DB search
MKRNLLFSLGLSLLIVLSGLSALAQVKLSGKVTDENQQPFPGVVVQQLNTPNKTATDANG
AYVITLLPDGPKSLVFNYVGYLPVTLPYTGNALLNLSMKPSVSDLNEVIVVGYTSLRKNT
ISGAMGNLNVGDGEKRRVPDVAQMLQGQVSGVQVTQSTGAPGDPINIRIRGENTIGFNSP
LFIVDGTPTLDISFLNPSDIKSLSVMKDAASAAIYGARAAGGVVQITTKQGVANRSTLEL
SYYNGIQKVTNLPTLLNTAQYLSKQEQAWKNGGKPDPNPFTAAKGRTDLADTDWLNELFE
TGRSQNAQLTASGGSDQVQYLLSGAYYKQNGIVVYNHDQYERFNFRANINAKLTDRFKIG
TNLQMSTAKQDWLSSKGDAPGIIRHALLRPPVLSVFKDPSDPTYKTDNPFTDLPFYKFNS
SNGGWDQNFERTSNPIALAYFANDKRNNVKTFGNAYAEYAFLGDKSLTLRTNLGVDLNFL
HNKAFLQNFGDDDNNDPNEVDPGAGRQNRPNGLNEERGEELNLTWNNTLNYVKTIDKHAI
NGLVGTEYIKNKASGLSASRKRYDYTTNSFQYIDFGSSARDLWNGGNASEWALFSVFASG
TYVYDSRYMLTANLRGDASSRFGENKQWGYFPSVSAGWAISEESFMKEVKWISNLKLRAS
TGKLGNQQIPNYAYLSTMIKDGEGYSLNRYGNPDLKWETTSQQNIGLDFNLFSNKLALSA
DYFVKTTSDILLQLSLPEMVGSVSPTYVNAGKVRNKGFEFSASYRNAIGDFNYSLSGNMA
TLNNKVIQLHPNVPTLSGPFTRTVPGQPLNAFYGYKMEGIYQTQAEVTQHLSGTSNPSQV
PGDIKFADLDGNGQINDNDRTFLGNPIPKFSYGINLSGGYKGFDFSVFMQGVQGIDKYND
AKKITDFDSRPFNSSIAVLQSWNGPGTSNTMPRVSTTDTGVSRVSSLFVEDASYFRIKNV
ELGYSFGDLMKKTKLGVKDVRLYVSGQNLYTSTKYSGLDPESIDQVDMGTYPQSRAFLFG
VNVKF
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaatctactcttctcactgggtttgtcactgttaatcgtgctatcagggctt
agtgctctggcccaggtaaaactaagtggaaaagtgactgatgaaaatcagcaacccttt
ccgggggttgttgttcagcaactgaatacaccaaacaaaacggctacggatgcaaatgga
gcatatgtgattacgctacttccggacggcccgaaatcactcgtgtttaattatgttggt
tatcttccggtaacgcttccttataccggaaatgcactattgaacctatcgatgaaaccc
agtgtttcagatttgaatgaggtcatcgtagtggggtatacgagcttacgtaaaaatacc
atttccggagcgatgggaaacctgaatgttggtgatggagagaaacgaagggttcctgat
gtggcacaaatgctgcaaggtcaggtgtctggagtacaggtaacgcaaagtaccggcgca
ccaggtgacccgatcaatatccgcattcgcggagagaataccattggattcaacagccct
ttatttattgtagatggaacaccaacgctggacatttcttttttaaatccttcagatatt
aaaagcttatcagtcatgaaagatgccgcttctgctgcgatctatggtgcacgtgcggct
ggtggggtggttcagatcaccactaaacaaggggtagccaaccgctctacactggaactg
agctattataacggaattcagaaggtgaccaatctgcccacactcctaaatacggctcaa
tacctgagcaaacaggaacaggcctggaaaaatggggggaaaccggatccaaatcctttt
accgcagcgaagggaagaacggatctggcagataccgattggctgaatgaactttttgaa
acgggaaggtcccaaaatgcacagttaacggcaagtggtggcagcgatcaggttcaatac
cttttgtctggtgcttattacaaacaaaatggaattgtggtctataaccacgatcagtat
gaacgctttaatttcagggcaaatattaacgcaaaactgacggaccgctttaaaatcgga
accaatctccagatgtcaacggcaaaacaggactggttatcttcaaaaggtgacgcacca
gggattattcgccacgccctgttaagaccgccggtattgtcggttttcaaggacccttca
gacccaacttataaaaccgacaatccttttacggacctgcctttttataaattcaatagc
agcaatggcggatgggaccagaattttgagagaacttccaacccgatcgcactcgcttat
tttgccaacgacaaaagaaataatgtgaaaacttttggaaatgcctatgcggaatatgca
ttcctgggcgataaatccctgacgttaagaacaaacctgggtgtcgacctgaattttctg
cacaataaggcattcctgcaaaactttggagatgacgacaacaatgatcccaatgaggtg
gatccgggggcaggcagacaaaaccggccaaacggattgaacgaggaaagaggcgaggaa
ctgaacctgacctggaacaataccctgaattatgtcaaaacgattgataaacatgccatc
aacggattggtaggaacagaatatattaaaaataaagcatcagggctttctgcttccaga
aaacgttatgattataccactaacagttttcagtacatcgattttggctcttctgccaga
gacctttggaatggtggaaatgcgagtgaatgggcgctgttctctgtttttgcttccgga
acttatgtgtatgattcgcgctatatgttaacggcaaatctcaggggagatgcttcttcc
agatttggagagaataaacaatggggatattttccttctgtatctgccggatgggcgatc
tccgaagaatctttcatgaaggaggtcaaatggatttcaaacttaaaactaagggcaagt
acaggaaaactgggaaatcagcagattcctaattatgcctacctgagtaccatgattaaa
gatggggaaggatattcactgaaccgttatggcaatcccgacctgaaatgggaaacgact
tcacaacagaatatcggactggattttaacctgttcagtaacaaactggccctctcggcc
gattattttgtgaaaactacttctgatatccttttgcaactgagtttgcctgaaatggtg
ggttcagtgagcccgacgtatgtaaatgcaggtaaagtaagaaataaaggatttgaattt
tctgccagttatcgcaatgccatcggtgattttaactattccctaagcggaaatatggca
accttaaataacaaagtcatacagctacatccgaatgtgccgacgctgagcggaccattc
acaagaacggttcccggccaaccactaaatgcattctatggttataaaatggaaggaatt
taccaaacccaggccgaggtaacacaacacctgtccggaacaagtaatccatcacaggta
cccggagatatcaaatttgctgacctggatggaaatggccagatcaatgataatgaccgg
actttccttgggaacccgattcctaaattttcctatggcatcaacctgtctggtggttat
aaaggttttgacttttcggtattcatgcaaggagttcaggggatagacaaatacaatgat
gcgaagaagattaccgattttgacagcaggccatttaactcttcaatagcggttcttcaa
agctggaatggcccgggaacatcgaataccatgccgcgggtgagtaccaccgatacggga
gtaagccgggtgtccagtctgtttgttgaagacgcgtcttatttcaggattaaaaatgtg
gaactcggttattctttcggtgatctgatgaagaaaacaaaactgggagtaaaggatgtc
agactttatgtttctggtcagaacctgtatacaagcacgaagtacagtggcctggatccg
gaatctatcgatcaggtggatatggggacctacccgcaatcacgcgcattcctgtttggt
gtaaatgttaaattttaa
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