Pedobacter steynii: BFS30_02950
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Entry
BFS30_02950 CDS
T04469
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
psty
Pedobacter steynii
Pathway
psty03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BFS30_02950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psty03400
]
BFS30_02950
Enzymes [BR:
psty01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BFS30_02950
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BFS30_02950
DNA repair and recombination proteins [BR:
psty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BFS30_02950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
AOM76210
UniProt:
A0A1D7QBY8
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All DBs
Position
complement(703396..704175)
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AA seq
259 aa
AA seq
DB search
MPELPDLEVFRENLNERLAGKKLTTVQVPYDKKLNVSGDQLRAVLSGQELKSLSRSGKEL
HLNFEKGDVLALHLMLRGQLHFFEESHVIKSPVIELFFEGGTGLVMSDFQKMATPTLNPP
AAEAPDALDKSVNVDFLIKEFKGKKAAIKAILLDQNKIRGIGNAYADEILWKAGISPYSI
AGKIPEEKLKDLHRAINEVLKDAIVQIRKAHPGSITGEFRDFLKVHTQKYPKSPTGGEII
IQKSGARKTYYTEEQELFN
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagatttagaagttttcagggaaaacctgaatgaacgccttgcagga
aaaaaactgactacagtacaagtaccttacgataagaaattaaatgtcagtggcgatcag
ttaagggccgtgctctccggacaggaactcaagtccctgagccggtcgggcaaggaattg
catctcaattttgaaaaaggagatgtacttgctttgcacctgatgttaagggggcagctt
catttttttgaagaaagccatgtgataaaatctcccgttatagagctctttttcgaaggt
ggaacaggactggtgatgtctgattttcaaaagatggcaacgccaactttaaatcctccg
gctgccgaagctcctgatgcgctggataaaagcgtgaatgttgattttctgatcaaggaa
ttcaaaggtaaaaaggcggcgataaaggcgattctgctggatcagaataagatccgcgga
attggaaatgcctatgcggatgagattttgtggaaagccgggatttctccctattcaatc
gccgggaagattccggaagaaaaactgaaagacttacatcgggcgataaatgaggtactg
aaggatgcgatcgtgcaaatcagaaaggcacaccctggcagtattaccggtgaattccgt
gactttctgaaagtgcatacccagaaatatcctaaaagcccgacaggaggggagatcatt
attcaaaaatcaggagcgcggaagacctattatacggaggaacaggaactttttaactga
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