Pedobacter steynii: BFS30_03400
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Entry
BFS30_03400 CDS
T04469
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
psty
Pedobacter steynii
Pathway
psty03030
DNA replication
psty03430
Mismatch repair
psty03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BFS30_03400
03430 Mismatch repair
BFS30_03400
03440 Homologous recombination
BFS30_03400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psty03032
]
BFS30_03400
03400 DNA repair and recombination proteins [BR:
psty03400
]
BFS30_03400
Enzymes [BR:
psty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BFS30_03400
DNA replication proteins [BR:
psty03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BFS30_03400
DNA repair and recombination proteins [BR:
psty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BFS30_03400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AOM76285
UniProt:
A0A1D7QCD2
LinkDB
All DBs
Position
complement(817533..818558)
Genome browser
AA seq
341 aa
AA seq
DB search
MSAADIIKDIKARKFKPVYLLHGEEPYYIDQIIHYMEEHILTDMEKGFNQTVLYGKDTDM
ATIMNAAKRYPMMSDYQLIVVKEAQDLKWAKETEGSSKEAEFVQSYFEKPLPSTILVFGY
KYANFDKRKKLYKSIDKNGQIFQSEPVRDYKLAAWIDDLVKEKGYKIAPQASALMAEYLG
ADLSKIANEVEKLLLNIGKEVTIDTDLIQRNIGISKEYNVFELQKALAVKNVLKCNQIIN
YFADNPKANPMVMVMANLNAYFSKILKYHYLPNKGDAAKELGVNPYFVKDFETAARSYSL
PKTFDIISLLREYDLKSKGVDSTGNITDGELLKELLFKMLH
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgccgacataatcaaagacattaaagccagaaagtttaagcctgtttacctg
ttacatggtgaagagccttattatatagatcagattattcattatatggaagagcatatt
ctgactgatatggaaaaagggtttaatcaaaccgttctctatggcaaggacaccgatatg
gcaaccattatgaatgctgccaagcgttatccgatgatgtcggattatcaattgatcgtc
gtcaaggaagcacaggatttaaaatgggcaaaggaaactgaaggcagcagtaaagaggcc
gagtttgttcagagctatttcgaaaagccattgcccagcaccattctggtgtttgggtat
aaatatgccaactttgacaaacgtaagaaactttataaatcaatagataaaaatgggcag
atcttccagtctgagccggtaagggattataaacttgccgcctggatagatgatcttgtg
aaagagaaagggtataaaattgccccgcaggcatcagctttaatggcggaataccttggt
gccgacctttccaagattgccaatgaggtagagaaactgttgctgaatattggtaaggaa
gtaaccattgatactgatctgatccagagaaatattggtatcagtaaagaatacaatgtg
tttgaactgcaaaaagcacttgcagtaaagaatgtactgaagtgcaaccagatcattaat
tattttgccgataaccctaaagccaaccctatggtgatggtgatggccaacttaaatgct
tatttctccaaaatccttaaataccattatttgccgaataaaggtgacgctgcaaaggag
ctgggcgtaaacccttattttgttaaggactttgaaacggctgcacgtagttatagtctg
cctaagacttttgacatcatcagccttttgagagagtacgacctgaaaagcaagggggta
gacagtaccggtaacatcaccgatggagagctattaaaggaattactttttaaaatgctg
cattaa
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