Pedobacter steynii: BFS30_03530
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Entry
BFS30_03530 CDS
T04469
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty
Pedobacter steynii
Pathway
psty02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BFS30_03530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psty03021
]
BFS30_03530
Transcription machinery [BR:
psty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFS30_03530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
HTH_11
PF0610-like_N
HTH_24
DUF4250
Fe_dep_repress
UPF0122
HTH_10
Sigma70_ECF
HTH_23
DUF722
CENP-B_N
HTH_Mga
HTH_7
HTH_DeoR
HTH_Crp_2
HTH_AsnC-type
HTH_29
HTH_Tnp_ISL3
wHTH_Par
Sigma70_r3
DUF1492
Motif
Other DBs
NCBI-ProteinID:
AOM76309
UniProt:
A0A1D7QCM9
LinkDB
All DBs
Position
849303..849866
Genome browser
AA seq
187 aa
AA seq
DB search
MSYKLHNDQELTDLLKSDDRLAYAEIYKRYHAALYIHAFKRLQLREECRDLVHELFTTLW
IKRQEITFKTTLSGYLYTSVRNKIFDLLARQKLKTSYTQSIQQFAETGLVTTDHLARQNQ
LKTLIDQEIANLPERTRQIFELSRKRFLSHQEIAKELNISEQTVKTTVNNALRVLRIKFG
SMLFLSL
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacaaactccataatgaccaggaattaacagatttactgaagtccgatgacagg
ctggcgtatgctgaaatttacaagcgctatcacgctgccttatacatccatgcttttaaa
agacttcagttaagagaagagtgcagagacctggtgcatgagctttttaccactctatgg
atcaaacgtcaggagattacctttaaaaccaccctatccggctacctttatacttcagtc
agaaacaaaatatttgaccttcttgccagacagaaattaaaaacatcttatacccaatcc
attcagcaatttgcggaaaccggacttgtgaccacagatcacctggcccgtcaaaaccaa
ctcaaaacacttatagatcaggaaatcgcaaacctccctgaacgcacccgtcagatattt
gaactgagcagaaagagattccttagtcaccaggaaattgcaaaagaattgaacatctct
gaacagactgtgaaaaccaccgtaaacaacgcgctaagggtattgcgcattaagtttggt
tccatgctcttcctttctttataa
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