KEGG   Pedobacter steynii: BFS30_03530
Entry
BFS30_03530       CDS       T04469                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty  Pedobacter steynii
Pathway
psty02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psty00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BFS30_03530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psty03021]
    BFS30_03530
Transcription machinery [BR:psty03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BFS30_03530
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 GerE HTH_11 PF0610-like_N HTH_24 DUF4250 Fe_dep_repress UPF0122 HTH_10 Sigma70_ECF HTH_23 DUF722 CENP-B_N HTH_Mga HTH_7 HTH_DeoR HTH_Crp_2 HTH_AsnC-type HTH_29 HTH_Tnp_ISL3 wHTH_Par Sigma70_r3 DUF1492
Other DBs
NCBI-ProteinID: AOM76309
UniProt: A0A1D7QCM9
LinkDB
Position
849303..849866
AA seq 187 aa
MSYKLHNDQELTDLLKSDDRLAYAEIYKRYHAALYIHAFKRLQLREECRDLVHELFTTLW
IKRQEITFKTTLSGYLYTSVRNKIFDLLARQKLKTSYTQSIQQFAETGLVTTDHLARQNQ
LKTLIDQEIANLPERTRQIFELSRKRFLSHQEIAKELNISEQTVKTTVNNALRVLRIKFG
SMLFLSL
NT seq 564 nt   +upstreamnt  +downstreamnt
atgtcctacaaactccataatgaccaggaattaacagatttactgaagtccgatgacagg
ctggcgtatgctgaaatttacaagcgctatcacgctgccttatacatccatgcttttaaa
agacttcagttaagagaagagtgcagagacctggtgcatgagctttttaccactctatgg
atcaaacgtcaggagattacctttaaaaccaccctatccggctacctttatacttcagtc
agaaacaaaatatttgaccttcttgccagacagaaattaaaaacatcttatacccaatcc
attcagcaatttgcggaaaccggacttgtgaccacagatcacctggcccgtcaaaaccaa
ctcaaaacacttatagatcaggaaatcgcaaacctccctgaacgcacccgtcagatattt
gaactgagcagaaagagattccttagtcaccaggaaattgcaaaagaattgaacatctct
gaacagactgtgaaaaccaccgtaaacaacgcgctaagggtattgcgcattaagtttggt
tccatgctcttcctttctttataa

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