Pedobacter steynii: BFS30_03825
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Entry
BFS30_03825 CDS
T04469
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psty
Pedobacter steynii
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psty03032
]
BFS30_03825
03400 DNA repair and recombination proteins [BR:
psty03400
]
BFS30_03825
Enzymes [BR:
psty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BFS30_03825
DNA replication proteins [BR:
psty03032
]
Prokaryotic type
DNA Topoisomerases
BFS30_03825
DNA repair and recombination proteins [BR:
psty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BFS30_03825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AOM76358
UniProt:
A0A1D7QCD3
LinkDB
All DBs
Position
complement(953551..954609)
Genome browser
AA seq
352 aa
AA seq
DB search
MVETLEELKSTGLVYVTDSKPGIYRKGKPGKFHYVDARGNPIADENDLDRIKMLVLPPAW
TEVWISPKKNGYLQATGIDVAGRKQYRYHAEWTSRRSDSKYFRLLDFGKALPGARKRIAK
DLKRKNFDELKVLAICVEFMQKTLIRVGNESYKQLYGSYGLSTLRNKHVKINGNHLSLSF
VGKKGVQQELSLNDKTLSRLLRKCKEIPGQDLFQYYTADEERKSIDSGMVNNYIKEITGN
DFTAKDFRTWGGTLEALRQLAVCSAVAADDEKSRKKVIVEVLDCVASRLGNTRAVCKSAY
VYPLLLESFERGELTGYLKRIKKEETDTLAGIKNDEQVLMSFLRAVQKKKKP
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggtggagacactggaagagctcaaatcaacaggattggtatatgtaacggacagcaag
cctgggatatacaggaaaggtaagcctggaaagtttcattatgtagatgctcggggaaat
ccgatagcggatgaaaatgacctggacaggatcaagatgcttgtgcttcctccggcatgg
acagaggtctggatttctccgaagaagaacggttatctgcaggccacgggaatagatgtt
gcgggaaggaagcaataccgctaccatgcagaatggacctccaggcgttcggatagtaag
tatttcaggctactggactttggtaaagccctgccaggtgcgaggaagagaattgcaaaa
gacctgaaacgaaaaaattttgatgaattgaaagtcctggccatctgtgtggaatttatg
cagaagaccctgatccgtgtgggaaacgaatcttataaacagctgtatggaagttatgga
ctgagcacactccgaaacaaacatgttaagatcaatggaaatcatttgtcgttgagcttt
gtaggaaaaaaaggggtacagcaggagctgagtctcaatgataaaaccttgtccagatta
ctgaggaagtgtaaagagattcccggacaggacctgtttcaatattatactgcagatgaa
gaacgtaagtccatagattcgggaatggtcaataactatatcaaagagatcaccggaaat
gattttactgcaaaggatttccggacctggggaggaaccctggaagcactgagacaactg
gcggtctgtagtgctgtcgctgccgatgatgaaaagtcaaggaaaaaagtcattgttgaa
gtactggattgcgtggcttccaggcttggaaatacgcgtgccgtatgcaagagtgcttat
gtatatccgctattactcgaatcctttgaacggggagaactgaccggatacctgaagaga
ataaaaaaagaagagacagataccctggctggaattaaaaatgacgaacaggtactgatg
tcgttcttaagagctgtacagaaaaaaaagaagccctga
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