Pedobacter steynii: BFS30_05715
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Entry
BFS30_05715 CDS
T04469
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psty
Pedobacter steynii
Pathway
psty03030
DNA replication
psty03410
Base excision repair
psty03420
Nucleotide excision repair
psty03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BFS30_05715
03410 Base excision repair
BFS30_05715
03420 Nucleotide excision repair
BFS30_05715
03440 Homologous recombination
BFS30_05715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psty03032
]
BFS30_05715
03400 DNA repair and recombination proteins [BR:
psty03400
]
BFS30_05715
Enzymes [BR:
psty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BFS30_05715
DNA replication proteins [BR:
psty03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BFS30_05715
DNA repair and recombination proteins [BR:
psty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BFS30_05715
NER (nucleotide excision repair)
GGR (global genome repair) factors
BFS30_05715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
DUF3913
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AOM76701
UniProt:
A0A1D7QDF3
LinkDB
All DBs
Position
1408257..1411067
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AA seq
936 aa
AA seq
DB search
MKKLFLLDGMALIYRAHFALSKNPRFTSTGINTSAVMGFANTLMEVLKKEKPSHIAVVFD
TEAPTERHTDFEAYKAHRQAMPEDLSAALPYVFKLIEGFNIPVITKDGFEADDIIGTLAK
EGERQGFQVYCMTPDKDFAQLVSDNIFIYKPARMGNEMEILGVAEVLAKWEIENVTQVID
ILGLWGDAVDNIPGIPGIGEKTAKSLIKQYGSMENIIANSHELKGKQRENVEAFAEQGMI
SKKLATIILDVPVEFNPDTLILEEPSRELLEPLFAELEFRTIGKRVFGEGFSVTEAKGNV
SQQIDLFGNVVDQPAGKTANFVAPPSFEESEPSKTIENTIHDYQLVDTPELRKSLIAFLS
DQDSICVDTETTGTDANLAELVGLSFSTKPGEGYYVPLSAEREEVLPILEEFRSVLENEK
IAKIGQNIKYDILILKWYGISIKGTLFDTMLAHYLIDPDTRHNMDVLSENYLGYSPISIT
KLIGPKGKNQGNMRDVPVEQVVDYAAEDADVTLQLANIFRPMLKDLNAEELARDVENPLV
YVLADIEKEGVRIDIDTLINYSKELETDIRKFEQNVYDKCGLTFNLASPKQLGEVLFDKL
QLDPKAKKTKTGQYQTGEDVLLALAHKSDIVQDILDFRQLQKLKSTYVDALPLLVNPKTG
RVHTSYNQAVAATGRLSSNNPNLQNIPIRSDRGREVRKAFIARDEHHVLLSADYSQIELR
IIADISKEENMLDAFNKGIDIHTATAARVYGITIEEVTPNQRRNAKAVNFGIIYGQSAFG
LSQNLGIPRKEAAEIIEQYFTQYPGIKRYMSDTMNFARENGFVETILGRRRYLRDINSAN
QTVRGFAERNAINAPIQGSAADMIKVAMINIHKDILDQGLQSKMTMQVHDELVFDVLKTE
VEAMKKIITHRMKTAIKTTVPIEIEIGEGVNWLEAH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactttttcttcttgacggcatggctctcatatacagggcgcattttgcattg
agtaaaaatcccaggtttacctctacaggcattaatacatcggctgtaatggggttcgcc
aataccttaatggaggtgctcaaaaaagaaaaaccaagtcatattgctgtggtttttgat
accgaagccccaaccgaaagacataccgattttgaagcttataaagcccatagacaggcc
atgccagaggatctttctgcagctctgccttatgtgttcaaactgattgaggggtttaat
atcccggttatcactaaagatggctttgaagcagacgatattattggtacgctggctaaa
gaaggggaaagacagggcttccaggtatattgcatgacacctgataaggattttgcccaa
ctggtgtcggacaacatctttatctataaacctgccaggatgggtaatgaaatggaaatc
ctcggtgttgcagaagtgcttgctaaatgggaaatagaaaatgtaactcaggtaattgat
atccttggcttatggggagatgcggtagacaatattcctggaattccaggaattggagaa
aaaacggctaagtcgctgattaaacaatatggttcgatggagaacatcatcgccaattct
catgagctgaaaggtaaacaaagagaaaatgtggaggccttcgcggaacagggaatgatt
tctaaaaaattagctacaatcattctggacgttccggtagaatttaatccggatacctta
atcctggaagaaccaagcagagaattgctggagccacttttcgcggaactggaattcaga
accattggcaaaagggtttttggtgaaggatttagcgtaactgaggccaaaggcaatgtt
tcacagcaaatagacctgtttgggaatgtggtagaccagccggcaggaaaaacagctaat
tttgttgcacctccttcgtttgaagagagcgaaccttcaaaaacaatagagaatacaata
catgattatcagttggtagatactccggaattgcggaaatcactgattgcttttctatca
gatcaggacagcatttgtgtagatactgaaaccacaggaacggatgccaatcttgctgaa
ctggtcggtctttctttcagcaccaaacccggtgaagggtattatgtccccctatcggca
gaaagagaagaagtcctgccgattctggaggaattcagaagcgtcctcgaaaatgagaaa
attgccaaaatcggccagaatatcaagtatgatatcctgatactgaaatggtatggaatt
tctatcaaaggaacgctatttgataccatgctggcccattatttaattgacccggatacc
agacacaacatggatgtgctgtcagagaattatctggggtactcaccgatttctattacc
aaactgattggtccgaaagggaagaatcagggaaatatgagagatgttccggtagaacag
gtagtcgattatgctgcggaagatgctgatgttacgctacaactggctaatatctttagg
ccaatgctaaaagaccttaatgcagaagaactggcaagggatgtagaaaatccattggtt
tatgtgcttgctgatattgaaaaagaaggcgtaagaattgacattgataccctgatcaac
tattctaaagaactggaaacagacatccgtaagttcgaacagaatgtatacgataaatgc
ggactaacctttaacctggcctcaccaaaacagttgggagaagttttgtttgacaagctt
caactggatcctaaagctaagaaaaccaagacagggcagtatcagactggtgaagatgta
ttgctggcattagcacataaaagtgatattgtacaggatatattagatttccgccagttg
cagaaactgaagtctacctatgttgacgcgcttccattgttggtaaatcctaaaaccggc
agggtacataccagctacaaccaggcggtagcagcaaccggaaggctcagttctaataac
cccaatctgcagaacatcccgattcgaagtgaccgtggcagggaagtgcgtaaagcattt
attgcaagagatgagcatcatgtattgctatctgcagattattcccagatagaacttcgc
attattgccgacatcagcaaggaagagaatatgctggatgcattcaacaaagggatcgac
attcatactgcaactgcagcaagggtatatggaattacaattgaagaagtaacacctaac
cagagacgaaatgcgaaagcggtgaactttggtattatttacggacaatctgcctttggt
ttatctcaaaatctgggaataccaaggaaggaagctgcggaaattatagaacagtacttt
acacagtatcccggaattaagcgatatatgtctgatacgatgaatttcgcccgagaaaat
ggttttgtagaaacaattttgggaagaagaaggtatttaagagatattaattctgccaat
cagacggtccgtggttttgcagaacgaaatgccattaatgcaccaatacagggctctgcg
gcagatatgattaaggtagctatgatcaatatacacaaggatattctggatcagggatta
caatctaaaatgacaatgcaggtgcatgatgagttggtgttcgatgttttaaagacagag
gtagaagcgatgaaaaagatcattacacatcggatgaaaacagcaattaagactaccgta
ccgattgaaattgaaattggtgaaggtgtaaactggttggaagcacactaa
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