Pedobacter steynii: BFS30_07025
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Entry
BFS30_07025 CDS
T04469
Name
(GenBank) 23S rRNA pseudouridine synthase F
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
psty
Pedobacter steynii
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psty03009
]
BFS30_07025
Enzymes [BR:
psty01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
BFS30_07025
Ribosome biogenesis [BR:
psty03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BFS30_07025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AOM76943
UniProt:
A0A1D7QE23
LinkDB
All DBs
Position
complement(1706143..1707180)
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AA seq
345 aa
AA seq
DB search
MSDSTTRLNKYISESGLCSRRAADRYIEQGNVFINGKKAKVGDKVFFGDIVTVNGQTIEP
KEVDQSILIAYNKPVGITSTTEAGVKSNMVDHVNHSERVFPIGRLDKDSQGLIFLTNNGD
LVNKILRAGNNHEKEYVVTVNKPLTEQFITGMAKGVPVLGVMTKKCKVTKESTFVFKIIL
IQGLNRQIRRMCEYFGFEVTKLERTRIMNIGLKGIPVGEWRELTPEEQTGIYNLVAKSSS
LAAASSPKKTTKKPLEEFQEKPVSRKAASGRPSRGPRAGGSGEASSGPRNASSGKPRSEQ
KSGAPYRGSAAASNDWNKTNGPSKRPVRPSKGKPGVPGKSRGPKR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattctactacccgattaaataaatacattagtgagagcggtctgtgctccaga
agagctgcagacagatatatagaacaaggaaatgtatttatcaatggcaagaaagccaag
gtaggcgacaaagtattttttggagacatcgtgaccgttaatggtcagactatagaacca
aaagaagtagatcagtctatcctgattgcttataataaacctgtcggcatcaccagtact
actgaagccggggtaaaaagcaatatggtagatcacgtaaaccatagtgagcgtgttttt
cctatcggtcgtctggacaaagattctcagggactgattttcctgaccaataacggggat
ctggtaaataaaatccttcgtgcaggaaacaaccatgaaaaggaatacgtcgttacggta
aataaacctttaaccgagcagttcattacaggcatggcaaagggtgtaccggtactgggt
gtaatgaccaagaaatgtaaagtaactaaagaaagtacttttgttttcaagatcatcctt
attcagggcttgaaccgacaaatccgaagaatgtgtgaatattttggatttgaagtgacc
aaactggaacgtaccaggatcatgaatattggtctgaagggaattcctgtaggagaatgg
agagaactgacccctgaagaacaaaccggaatttataacctggtggcaaaatccagctct
ttagctgctgcatcttccccgaagaaaaccactaaaaaaccattagaagaattccaggaa
aaacctgtatccagaaaagctgcttcaggcaggccttcccgcggaccaagagcaggagga
tcaggagaagcttcgtcaggacccagaaatgcatcttcaggaaaaccaagatcagaacaa
aaatcaggagctccataccgtggttctgctgctgccagtaacgactggaataaaaccaac
ggaccaagtaaaagaccggtaagaccttctaaaggtaaacccggagttcccggaaaaagc
agagggccaaagcgttaa
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