KEGG   Pedobacter steynii: BFS30_07925
Entry
BFS30_07925       CDS       T04469                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty  Pedobacter steynii
Pathway
psty02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psty00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BFS30_07925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psty03021]
    BFS30_07925
Transcription machinery [BR:psty03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BFS30_07925
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_ECF Sigma70_r4 HTH_23 GerE HTH_24 HTH_10 HTH_28 HTH_11 PF0610-like_N HTH_40 Xre-like-HTH HTH_17 WHD_HrcA HTH_Tnp_ISL3 DUF134
Other DBs
NCBI-ProteinID: AOM77099
UniProt: A0A1D7QES2
LinkDB
Position
complement(1925492..1926115)
AA seq 207 aa
MPEEKLKIVQLFEEIQNGDRAAFNQLFFLYYDKLLSFARQYTKQQESAEEITSELFVRLW
LKRDRLSKVVKPEVYLYVSIKNACLNLIRSERKRHLLFTKFPGDQSFEEPLDDNYVGTDD
KELVRLMNQAIAALPEQRKIIFRLVKEQGLKSNAVAEILGISVRTVENQLYKAVKSLADS
ISGYLGYHPQGKTARKQAHSDLLFFFL
NT seq 624 nt   +upstreamnt  +downstreamnt
atgccagaagaaaaattgaagattgtacaattgtttgaagaaatccagaatggggacagg
gctgcattcaatcagcttttttttctgtactacgataagctcctctcttttgcaaggcaa
tataccaaacagcaggaaagtgctgaagagataacctctgagcttttcgtcaggttatgg
ctaaaacgggacaggttatcaaaagtggtcaaaccagaagtctatctgtatgtctccatc
aagaatgcctgtcttaatttaatcagatctgaaagaaaacgacaccttttatttaccaaa
tttcccggtgatcaatcatttgaagaaccattggatgataattacgtagggaccgatgat
aaggaactggtgcgattgatgaaccaggcgatcgctgctcttccggaacagcgtaaaatc
atattcaggctcgttaaagagcaagggcttaaaagcaatgcagtagctgagatattgggt
atttcagtaaggacagttgaaaatcagctgtacaaggcagtaaaatcacttgcggattct
ataagtggatatctgggctaccatccacagggaaaaacagccaggaagcaagcacattct
gaccttctgttcttttttttatga

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