Pedobacter steynii: BFS30_07995
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Entry
BFS30_07995 CDS
T04469
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
psty
Pedobacter steynii
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psty03016
]
BFS30_07995
Enzymes [BR:
psty01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BFS30_07995
Transfer RNA biogenesis [BR:
psty03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BFS30_07995
Prokaryotic type
BFS30_07995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AOM77112
UniProt:
A0A1D7QEK6
LinkDB
All DBs
Position
complement(1937402..1938202)
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AA seq
266 aa
AA seq
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MRYFVHIGYHGLHFNGWQKQPGILNIQGVLEQALTQILKTPVFINGCGRTDAHVHASQFF
FHMDIEQPWDFDLIFRLNKLLPASIAIFDIIPMSGMQHARFDAVQRCYDYFIHTYKSPFL
SGLSSFYLLKDLHVDKMKQAAALLPQYKDYRPFCTSPDKYEHTICNVMSAGLTVDASGDR
LRFQISSNRFLSKMIRIIMGQLLKIGKGDLSVDEFEDYLITKRTPTLITPAHPQGLYLSK
VTYPYLNLPPRTEFSAILQHQVDQFG
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
ttgaggtatttcgtacatatcggctatcatggccttcattttaatggttggcaaaaacaa
cccgggatattaaatattcagggggtactggaacaggcattgactcagattctgaagacg
ccggtttttatcaacggctgcggaagaacagatgcccatgtccatgccagtcagttcttt
tttcatatggacattgaacagccctgggatttcgatcttattttcaggctgaataagctc
ttaccagccagtattgccatctttgacatcattcctatgtccggtatgcaacatgcccgg
tttgacgctgtacagcgctgctatgactactttatccatacctataaaagccctttcctg
agtggcctcagttccttctatttattgaaagacctgcatgttgataaaatgaaacaggca
gcagccttattgcctcaatacaaagactaccgtcccttttgtaccagtccggataagtat
gagcataccatttgtaacgtcatgtcggccgggctaactgtggatgccagcggagatcgt
ctgcgcttccagatttcttccaaccggtttctcagcaaaatgatccggatcattatggga
caattgttaaaaattggaaagggcgacttaagcgtagatgaatttgaggattacctgatt
actaaaaggaccccaacactgatcactcctgcccatccgcagggattatacctgtcaaag
gtaacctatccctacctgaaccttcccccaagaacggaattttcggctattctacagcat
caggtagatcagttcggttag
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