Pedobacter steynii: BFS30_08625
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Entry
BFS30_08625 CDS
T04469
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psty
Pedobacter steynii
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psty03009
]
BFS30_08625
Enzymes [BR:
psty01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BFS30_08625
Ribosome biogenesis [BR:
psty03009
]
Prokaryotic type
ribosomal protein modification factors
BFS30_08625
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AOM77217
UniProt:
A0A1D7QEW7
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All DBs
Position
complement(2087048..2088382)
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AA seq
444 aa
AA seq
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MNTKTVSKIIPVKKPKINVITLGCSKNLYDSEVLMGQLRGNSMDVVHESDKMGKDDIVVI
NTCGFIDNAKQESIDTILQYSELKEAGKIGKVIVTGCLSERYKPELESEITNVDAFFGTN
DLNNILHSLGANYKHELIGERLLTTPSHFAYFKIAEGCNRPCSFCAIPLMRGKHVSRDMQ
ELVNEAKILAANGTKELILIAQDLTYYGLDIYGKRNLDELLRRLSDVAGIEWIRLQYAYP
SGFPMEILDAMNERENICKYLDMPLQHITDNMLKSMRRGITKQKTIDIVNQIRDKVPNIA
MRTTLICGYPGETEQDFEEMLSWVEETRFDRLGCFTYSHEEKTHAHNLVDDVPEEVKQER
VDAIMELQQGISFDINQEKVGKTYKVLVDRKEGDFFIGRTEFDSPEVDNEVLIDAATGYA
ANGSFVNVKIDRAEDFDLYGQIVK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaaaaccgtatctaagattatccctgttaaaaaacctaaaatcaatgtcatt
actttgggttgttccaaaaacctttatgattcagaagttttaatggggcagcttcgcggc
aatagcatggatgtggttcatgaatctgataaaatgggtaaggacgatattgtagtcatc
aatacctgcggttttatcgacaatgcaaaacaggaatctatcgataccatcctgcaatac
agtgagcttaaagaagctggaaaaataggaaaggtaattgttaccggatgtttgtctgaa
aggtacaaacccgagttggaatcagagattaccaatgtagatgcttttttcggcaccaac
gatttaaataacattctacattccttaggtgcgaattacaaacacgagctgattggagaa
aggttactgaccactccttctcatttcgcatatttcaaaattgcagagggctgtaaccgt
ccctgctctttctgtgccattcctttaatgcgtggaaaacacgtttcccgcgatatgcag
gagttggtgaatgaagcaaaaattcttgctgctaacggaacaaaagaactgattctgatt
gctcaggatctgacttattacggtctggatatttacggaaaacgtaatctggacgagttg
ttaagacgcctttctgatgttgccggaattgaatggatcaggttacaatatgcttaccct
tcaggtttccctatggaaattctggatgccatgaatgagcgtgagaacatctgtaaatat
ctggatatgccattacagcatattacggataacatgttgaaatctatgcgtcgcgggatt
acgaaacaaaaaactatagatatcgttaaccagatcagagataaagtgcctaatatcgct
atgcgtaccactttaatttgtgggtatccgggcgaaacagaacaggattttgaagaaatg
ctgagctgggtagaagagaccaggttcgacagactgggatgtttcacttattctcatgag
gaaaaaacccatgcccataacctggtggatgacgtacctgaagaagtaaaacaggaacgt
gtggatgccattatggaattacaacagggaatttcatttgatatcaatcaggaaaaagta
ggaaaaacctataaagttctggtggatagaaaagagggtgatttctttatcggacgtaca
gaatttgactctccggaggttgataatgaggttttaattgatgctgcgacaggttacgca
gccaatggaagctttgttaacgtgaagattgacagagcggaggacttcgatctatatgga
caaattgtaaaataa
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