Pedobacter steynii: BFS30_11160
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Entry
BFS30_11160 CDS
T04469
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psty
Pedobacter steynii
Pathway
psty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BFS30_11160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psty03019
]
BFS30_11160
03110 Chaperones and folding catalysts [BR:
psty03110
]
BFS30_11160
03029 Mitochondrial biogenesis [BR:
psty03029
]
BFS30_11160
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psty04147
]
BFS30_11160
Enzymes [BR:
psty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BFS30_11160
Messenger RNA biogenesis [BR:
psty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BFS30_11160
Chaperones and folding catalysts [BR:
psty03110
]
Heat shock proteins
HSP60 / Chaperonin
BFS30_11160
Mitochondrial biogenesis [BR:
psty03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BFS30_11160
Exosome [BR:
psty04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BFS30_11160
Exosomal proteins of other body fluids (saliva and urine)
BFS30_11160
Exosomal proteins of breast cancer cells
BFS30_11160
Exosomal proteins of colorectal cancer cells
BFS30_11160
Exosomal proteins of bladder cancer cells
BFS30_11160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
Motif
Other DBs
NCBI-ProteinID:
AOM77678
UniProt:
A0A1D7QG53
LinkDB
All DBs
Position
complement(2686283..2687923)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKQVKYNVEARDALKRGVDILANAVKVTLGPKGRNVIIDKKFGSPAITKDGVTVAKEIE
LKDPIENMGAQMVKEVASKTADIAGDGTTTATVLAQAIVTAGIKNVAAGANPMDLKRGID
KAVSAIVANLKSQSQTVGEDNNKIKQVASISANNDEVIGSLIAEAMGKVGKDGVITVEEA
KGTETEVKTVEGMQFDRGYLSPYFVTNADKMEAELENPYILIYDKKISNMKELLPVLEKQ
VQTGKPLLIIAEDLDGEALATLVVNKIRGSLKVVAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGYKLENADLSYLGTAEKVVVDKDNTTVINGAGKSEDIKARVNQIKAQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVAFI
RAIEALEGMKGSNDDETTGIAIVKRAIEEPLRQICQNAGIEGSIVVQKVKEGKADFGYNA
RTDVYENLIAAGVIDPTKVGRVALENAASIAAMLLTTECVLADDPEDAPAGAGMPPMGGG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaagtaaaatataatgtagaagcccgtgacgccctgaaaagaggtgtggat
attttggctaatgcagtaaaagtaaccctaggtccaaaaggacgtaatgtaattatcgac
aaaaaatttggctcaccagcaatcactaaagatggtgtaactgtagctaaagaaattgaa
ttaaaagacccaatcgaaaatatgggtgctcaaatggttaaagaagtggcttcaaaaact
gcagatattgcaggtgacggaactacaactgcaactgtattggcacaggcaattgtaact
gcaggtattaaaaacgttgctgccggtgcaaatccaatggatttgaaacgtggtatcgac
aaagcagtttctgcaattgtggctaacttaaaatctcagtctcagactgtaggtgaagac
aataacaaaatcaaacaggttgcttctatctcagcaaacaatgatgaagttatcggttct
cttattgcagaggcaatgggtaaagtaggtaaagacggtgtaattactgtggaagaagca
aaaggtactgaaactgaagtaaaaacagtagaaggtatgcaatttgaccgtggttactta
tctccttacttcgtaactaatgcagataaaatggaagcggaattagaaaacccttacatt
ttaatctatgacaaaaaaatcagcaacatgaaagaattgttgccggttttagagaaacaa
gtacaaacaggaaaaccattattgatcattgctgaagacttagatggcgaagcattggct
acattggtagtgaacaagatccgtggatctctgaaagttgttgcggttaaagctccaggt
ttcggtgaccgtagaaaagccatgttagaagacatcgcaattctaactggtggtactgta
atttctgaagaaagaggttataaattagagaatgctgaccttagctatttaggtactgcg
gagaaagttgtagtagataaagacaatactacagtaatcaatggtgctggtaaatcggaa
gatatcaaagcccgcgttaaccagatcaaagctcaaatcgagactactacatctgattat
gacaaagagaaattacaagagcgtctggctaaattagctggtggtgttgcagttctttat
gttggtgcagcttctgaagttgaaatgaaagagaaaaaagaccgtgttgacgatgcatta
catgcaacccgtgctgcggttgaagaaggtatcgttgccggtggtggtgttgctttcatc
cgtgctattgaagccttagaaggaatgaaaggtagcaacgatgatgaaactactggtatt
gctattgtaaaacgtgcaatcgaagagccattacgtcaaatctgtcagaatgcaggtatt
gaaggttctatcgtggtacaaaaagttaaagaaggtaaagctgactttggctacaatgca
cgtactgacgtatatgaaaacttaatcgctgcaggtgttatcgatccgactaaagttggt
cgtgttgcacttgaaaacgcagcttctattgcagcaatgttgttaacaacagaatgcgta
ttagctgatgatcctgaagatgctcctgctggtgcaggtatgcctccaatgggtggcggt
ggtatgggtggaatgatgtaa
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