Pedobacter steynii: BFS30_11210
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Entry
BFS30_11210 CDS
T04469
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty
Pedobacter steynii
Pathway
psty02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BFS30_11210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psty03021
]
BFS30_11210
Transcription machinery [BR:
psty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFS30_11210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_10
HTH_24
HTH_40
HTH_5
HTH_23
HTH_11
DUF134
Motif
Other DBs
NCBI-ProteinID:
AOM77688
UniProt:
A0A1D7QG65
LinkDB
All DBs
Position
2695730..2696341
Genome browser
AA seq
203 aa
AA seq
DB search
MSKDPMCSLIEEDVRLISAISRKDKKVFEAFYKKYYKQLFSTAYRYVGQAEAAEEIVHDL
FIAIWNKADQLNIQYSMKSYLFRAIVNSSLNFIKKEKIDTEKQLAWMAAHDGYESLEEAN
ENNEILLKNLEEALSLLPAKCKQVMYLSRFGKLKQQEIADQMGISLKTVKNHLTYGFQKL
REHLGKYGQALISLILFLKIMIR
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagacccgatgtgtagcctgattgaagaagatgtgagattgatcagcgccatc
agtagaaaagataaaaaggtgtttgaagccttttataagaaatattataaacagttgttc
agtaccgcttaccgttatgtaggacaggctgaagccgctgaggaaattgttcatgatttg
tttattgccatatggaataaggcagatcagctaaatatccagtattcaatgaaaagttat
ctgttcagggcaattgtaaattcctccttgaatttcatcaaaaaggaaaagatagatacg
gaaaaacaattggcctggatggcagctcatgatggatatgaatctttggaggaagcaaat
gaaaacaatgaaatattgttgaaaaatctcgaagaagccctgtccctgttgcccgccaaa
tgtaaacaggtgatgtatctgagccgttttgggaaattgaaacaacaggagatcgcagat
cagatggggatttccctgaaaacagttaaaaaccatttgacctatggctttcagaagctt
agggagcaccttggaaaatatggacaggcactcatttctttgatcctgttcttaaaaata
atgatacgctaa
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integrated database retrieval system