Pedobacter steynii: BFS30_11515
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Entry
BFS30_11515 CDS
T04469
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty
Pedobacter steynii
Pathway
psty02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BFS30_11515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psty03021
]
BFS30_11515
Transcription machinery [BR:
psty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFS30_11515
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_Tnp_4
Sigma70_ECF
HTH_23
DUF1492
HTH_24
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AOM77743
UniProt:
A0A1D7QGG0
LinkDB
All DBs
Position
2770133..2770750
Genome browser
AA seq
205 aa
AA seq
DB search
MRVRQSIEVISGSDLLLLIEDNNKDAFTDFYSHHFRKLILVSDKYVQSIPAAEEIVQDVF
LKIWEEKELLSEIKSINAYLYRSVVNSSINFVNRQKNIEKHHLKIADHVVIDDAERHEEE
NELIVLLYHEIELLPEKCQQVFKLSRLEGLKYRDIALRLNISEKTVENHMGNALKILRSR
VSKAAEQSPLRKKFKYFYLMAMYLY
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttagacaatcaattgaggtaatttcagggagtgatctactcttacttattgag
gataacaataaggatgcattcactgatttttattctcatcatttcaggaaattaattctg
gtttctgacaaatatgttcagagtattcctgctgcagaagaaattgtacaagatgttttt
ctaaaaatatgggaggagaaagagttattgtcagaaatcaaatccattaacgcttatcta
taccgaagtgtagtgaattcgtctattaacttcgtcaatcgtcaaaagaatatagaaaaa
caccaccttaaaattgcggatcatgtagttatcgatgatgctgaaagacatgaagaggaa
aatgagttgattgttctgctatatcatgagattgaactgcttcctgaaaagtgccagcag
gtttttaaactgagcagattggaaggattaaaatatcgtgatattgccttgcgattgaat
atttctgagaagacagttgaaaatcatatggggaatgcacttaagatccttcgaagtcgt
gtttctaaagcggcggagcaaagccctttgagaaagaagttcaaatatttctatctgatg
gccatgtatttatactaa
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