Pedobacter steynii: BFS30_12250
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Entry
BFS30_12250 CDS
T04469
Name
(GenBank) pseudouridylate synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
psty
Pedobacter steynii
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psty03009
]
BFS30_12250
Enzymes [BR:
psty01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
BFS30_12250
Ribosome biogenesis [BR:
psty03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BFS30_12250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
DUF6831
Motif
Other DBs
NCBI-ProteinID:
AOM77876
UniProt:
A0A1D7QGR5
LinkDB
All DBs
Position
complement(2944232..2945665)
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AA seq
477 aa
AA seq
DB search
MIKNNNRNSRDDKSKPGNRSTTGKSRSGTDSSYKGKSKFDDKEGKDSKFGGPRDFKPREG
DRKDFKPREGGSRDYKPREGDKKDYNPRGGSRDGESRSFKPRGDNESRDFKPRAGRDGDS
KSFSPRPGGAKDFKPRAGKDGGSKDYKPRPHSAGSSRDVPPGDKTRSYIKKDNFGNGDQP
FRKFDDKKGQASRSTDSRPFRKRDDDNSGGGFKPRGDRAEREESNTVMRGRKAPIPKDDG
LIRLNRYIANSGICSRRKADELIAAGVVSVNGEAVSELGHKIDPAKDEIRYNGELLKREK
KVYVLLNKPKDYITTTDDPQERRTVMQLVDKASRERIYPVGRLDRNTTGLLLMTNDGDLA
DKLSHPKNGITKIYHVELSRSLSQGDLNKIQFGLELEDGIIKPDNVSYVTGGSKREVGIQ
IHSGKNRIVRRIFEHLGYDVVKLDRVVYGNLTKKDLPRGRWRYLEEHELIQIKHLIK
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaaacaacaacaggaacagtcgggatgacaagtccaaaccgggaaacagaagt
acaacaggcaaaagtcgtagtggaacagatagttcttacaaaggcaaaagcaagtttgac
gacaaggaggggaaggatagtaagtttggtggtccaagagattttaaaccaagagaaggc
gatagaaaagattttaagccaagagaaggcggatcaagggactacaagcctagagaggga
gacaaaaaagattacaatccaagaggaggaagcagagatggagaatccagaagcttcaaa
ccaagaggagataatgagtcaagagactttaaaccaagagcaggcagagatggcgattca
aaaagcttttctccaagacctggtggcgccaaagacttcaagccaagagctggaaaggat
ggcggcagtaaagattataaaccaagaccacatagtgcgggaagttcaagagatgttcct
cctggggacaaaacccgtagttatataaagaaagacaatttcggaaatggtgatcagcca
ttcagaaaattcgatgataaaaaaggacaggcttccagaagtacggatagcagacctttc
agaaaaagagacgacgacaattcaggaggaggttttaaacctcgcggagaccgtgctgaa
cgtgaagaaagcaatacggtaatgcgtggcagaaaagctccgattccaaaagatgacgga
ctgatccgtttgaaccgttatattgccaattcaggtatttgctcacgtcgtaaagccgat
gaactgattgcagcaggtgtagtatccgtaaacggagaagcagtttctgaacttggtcat
aaaattgacccggcaaaagatgaaatccgctataacggagaactattgaaacgcgaaaag
aaagtttacgtattactgaataaacctaaagattacatcactactactgacgatcctcag
gaacgccgtacagtaatgcagttggtagataaagcaagcagagaacgcatctatccggta
ggaagattagaccgtaatactacaggtcttttattgatgaccaatgatggtgaccttgct
gataaattatctcacccaaaaaatggcatcaccaagatctatcatgtggaattaagcaga
agcttaagtcagggagatctgaacaaaatacagttcggtcttgagctggaagacggaatt
atcaaaccagataacgtttcatatgtaactggcggtagtaaacgtgaagtaggtatccag
atccatagtggcaaaaacagaatcgtaagaagaatatttgaacacctgggttatgatgtg
gtaaaacttgaccgcgttgtttatggtaacctgactaaaaaagaccttccacgtggaaga
tggcgctatttagaggagcacgaattaatccagattaaacatctgataaaataa
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