Pedobacter steynii: BFS30_12750
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Entry
BFS30_12750 CDS
T04469
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psty
Pedobacter steynii
Pathway
psty03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BFS30_12750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psty03021
]
BFS30_12750
03400 DNA repair and recombination proteins [BR:
psty03400
]
BFS30_12750
Enzymes [BR:
psty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BFS30_12750
Transcription machinery [BR:
psty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BFS30_12750
DNA repair and recombination proteins [BR:
psty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BFS30_12750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AOM77971
UniProt:
A0A1D7QH28
LinkDB
All DBs
Position
3044626..3045618
Genome browser
AA seq
330 aa
AA seq
DB search
MAILAFQKPDKVIMQKSTDFDGIFEFRPLEPGFGVTIGNALRRILLSSLEGYAITSIRFS
GVSHEFSTMKGVVEDLTEIILNLKQVRFKKVGDSGDSEKVFILVNGQDQFTAGDITKFSN
NFEVLNPDFVICNMEKTVTLEVELTINKGRGYVPAEENKINDAVVGVIAIDSIFTPMKNV
KYTIENYRVEQKTDYEKLILDISTDGSIHPEEALKEAAKILIQHFMLFSDENLVLESQAK
EETKEVDEEILHMRKILKTELVDLDLSVRALNCLKAADIRTLADLVSYDVADMLKFRNFG
KKSLTEIQELVKSKSLSFGMNLSKFKLDEE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttagcatttcagaaacccgataaggtaatcatgcagaaatcaaccgatttc
gatggtatatttgaatttcgtcctttagagcccggtttcggtgtaacaattggtaacgcc
ctaagaagaattttactttcttcattagaaggttatgccattacaagtattcgtttttct
ggcgtatctcacgagttttctacaatgaaaggtgttgtagaagatttgacggaaatcatc
cttaacttaaaacaagtgcgttttaaaaaagttggtgattctggtgattctgaaaaagtt
ttcattttagtaaacggtcaagatcagtttactgctggagatattacaaaattctctaac
aacttcgaggttcttaaccctgatttcgttatttgtaacatggagaaaacggtaacttta
gaggtagaattaactatcaataaaggtcgcggttatgttcctgctgaagaaaataaaatc
aatgatgctgtagttggtgtaattgcgatcgattcgatctttaccccaatgaaaaatgta
aaatacacgattgaaaactatcgtgttgaacaaaaaacagattatgaaaaattaatatta
gatatctctacagatggttctatccatcctgaagaagcactaaaagaagctgcgaaaatt
ttaatccagcactttatgttgttctctgatgagaatttggtattagaatctcaagctaag
gaagaaactaaagaggtagatgaggaaattctgcatatgcgtaagatccttaaaactgaa
ctggttgatttagatctttctgtacgtgctttaaattgcttaaaagcagctgatatccgt
actttagcggacctggtttcttacgatgtagctgatatgttaaaattcagaaacttcggt
aaaaaatcattgacagagattcaggaattggtgaaatctaaaagcttatctttcggtatg
aacttatcgaaatttaaactggacgaagaataa
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