Pedobacter steynii: BFS30_12780
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Entry
BFS30_12780 CDS
T04469
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
psty
Pedobacter steynii
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psty03400
]
BFS30_12780
DNA repair and recombination proteins [BR:
psty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
BFS30_12780
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA
TrwB_AAD_bind
ResIII
AAA_16
FtsK_SpoIIIE
AAA_10
AAA_30
CbiA
AAA_25
T2SSE
Zeta_toxin
AAA_7
AAA_6
nSTAND3
AAA_19
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AOM77977
UniProt:
A0A1D7QH53
LinkDB
All DBs
Position
complement(3051420..3052961)
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AA seq
513 aa
AA seq
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MSDQTQQFIEKVKTAYQPKGSYIYLGAGILDGEVLAEAEVNLYLHMMNRHGLVAGATGTG
KTRTLQLLAEQLSDAGVPVFMLDVKGDLSGLYQAGESNPKIEERSTQLNKPFTPSGYPIE
PYSLSGKLGAQMRATILEFGPTLLAKILDLNDTQTGVLSVIFKYADDSKLPLIDLNDLKK
LVSYLSDGPGKEEIKSDYGSISPATSGTILRKIITIEQQGLGAMFGERSFDIEDLFARTD
GKGTISLLNISDVQNQPKLYSTYLLSLLAELYYNLPEVGDLDKPKLVFFFDEAHLLFKDS
SKAFMEQIETIIRLIRSKGIGVFFCTQSPTDVPESVLSQLGNRIQHALRVFTPNDADALK
KTVNTYPTSAFYKIDKVLTSLGTGQALITVLNDKGIPTEVTATMLTPPKSVMGPMNASDY
GKLVQSSPMNQKYQESIDPESAYEILTKRINDNQAAEAPEEENTVKKEGKSIIEQVMGAT
ITRQIGKEIVRGLFGMLTGKKTRSSGGKGIFGF
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcaaacccaacagtttatagaaaaagttaaaacagcttatcaaccaaaaggc
tcctatatttatttaggcgccggaattctggatggtgaggttctggcagaagcagaagta
aatctctatttacacatgatgaaccgtcacgggcttgttgccggtgctacagggaccgga
aaaacgaggaccctgcaattacttgccgagcaactctccgacgcaggtgttcctgtattt
atgcttgatgtaaaaggcgatctttccggcttatatcaggccggagaaagcaatcctaaa
attgaggaaagatcaacgcagctgaataaaccatttacgccttcaggatacccgatagaa
ccttattccctttccggaaaattaggggctcagatgagggccacaattcttgaattcggc
ccgaccctactggcaaaaatcctggaccttaatgatactcaaactggagtattgtcggtt
atatttaaatatgctgatgatagtaaattaccattaatcgacctgaatgatcttaaaaaa
ctggtttcgtatctttcagacggacccgggaaagaagaaataaagagtgattatggatct
atttctcctgccacctcaggaactattctcagaaaaattatcaccattgagcaacaaggt
ctgggcgctatgttcggcgaacgctcttttgatattgaagacttatttgccaggacagat
ggtaaaggaactatttctcttttgaatatctccgatgttcagaatcaaccaaaattatat
tccacctatctattgagtttactggctgaattgtattataatttacctgaggtgggcgac
cttgacaaacctaagctggttttcttctttgacgaggcacacctgttgtttaaagactcc
tcaaaggcttttatggagcagattgaaacgatcatcagactcatcagatctaaggggata
ggcgtcttcttttgcacgcaatcaccaacggatgttcctgaaagtgtattatctcaattg
gggaaccgcatccagcatgccttaagggtatttacgcccaacgatgctgatgccttaaag
aaaacagtaaatacttatccgacttctgccttttataagatagacaaggtgctaacctct
ttaggaacagggcaagcgctgatcaccgttttgaatgataaagggattccgactgaagta
acagcaaccatgctgaccccgccgaaatcggtaatgggccccatgaatgcctcagactat
ggaaaattagtccagtccagccccatgaaccaaaaatatcaggaaagtattgatccggaa
agtgcatatgaaatcctgactaagcgaattaatgataatcaggctgcagaagcacccgag
gaggagaataccgttaaaaaggaaggaaaaagtattatagaacaggtaatgggcgccacc
ataaccagacagattggcaaggaaattgtacgtgggctgttcggaatgttaaccggcaaa
aaaacacgtagtagcggaggaaagggaatctttggtttttaa
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