Pedobacter steynii: BFS30_12980
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Entry
BFS30_12980 CDS
T04469
Name
(GenBank) hypothetical protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty
Pedobacter steynii
Pathway
psty02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BFS30_12980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psty03021
]
BFS30_12980
Transcription machinery [BR:
psty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFS30_12980
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_Tnp_ISL3
HTH_11
HTH_5
HTH_24
Sigma70_ECF
HTH_40
GerE
MarR
HTH_10
HTH_20
HTH_AsnC-type
HTH_23
Phage_CP76
PF0610-like_N
MobL
MarR_2
MatP_C
DUF1441
UPF0122
HTH_28
I-HmuI_NUMOD-like
HTH_7
ANIS5_cation-bd
Motif
Other DBs
NCBI-ProteinID:
AOM78013
UniProt:
A0A1D7QH69
LinkDB
All DBs
Position
complement(3100863..3101429)
Genome browser
AA seq
188 aa
AA seq
DB search
MRSYQTNSDLELVDLLKQDDRDAFAEMYRRHAHRLTDFASSKLYSLNDARDLIQDLFAGL
WADRNKIPVNTSLQSYLFASVRYKVIDKIRKNVTREEYAIIVQSLAMHSGHNPEKELEAK
ELRKIVDIAIEQLPPRTRAIYKLSRNEHQTISEIAEQLNLSDQTVKNQLTTAMKSLRETL
ERLSVLLL
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcttaccagaccaattcagatttggaacttgttgacttgctcaagcaggacgac
cgggacgcttttgccgaaatgtaccgcaggcatgctcatcggcttactgattttgcaagt
tcaaaactgtattcgttaaacgatgcaagagacctgattcaggacctcttcgccggttta
tgggcagaccgcaacaaaataccggttaacacttctctgcagtcttacttgtttgcctcg
gtacgctacaaggttattgataagatccgtaaaaatgttacccgggaagagtatgccatc
atcgttcagtcgctggccatgcatagcggtcataatccggaaaaagaactggaagcaaaa
gagctaaggaagattgtagatatagcgattgagcaactccctccccgcaccagagcaatc
tacaagctcagccggaatgaacatcaaaccatttcagagattgccgaacaacttaacctc
tctgatcagactgtaaaaaatcaattgacgacagcgatgaaatcccttagggagacactg
gaaaggctttctgtgctccttctttaa
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