KEGG   Pedobacter steynii: BFS30_12980
Entry
BFS30_12980       CDS       T04469                                 
Name
(GenBank) hypothetical protein
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty  Pedobacter steynii
Pathway
psty02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psty00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BFS30_12980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psty03021]
    BFS30_12980
Transcription machinery [BR:psty03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BFS30_12980
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 HTH_Tnp_ISL3 HTH_11 HTH_5 HTH_24 Sigma70_ECF HTH_40 GerE MarR HTH_10 HTH_20 HTH_AsnC-type HTH_23 Phage_CP76 PF0610-like_N MobL MarR_2 MatP_C DUF1441 UPF0122 HTH_28 I-HmuI_NUMOD-like HTH_7 ANIS5_cation-bd
Other DBs
NCBI-ProteinID: AOM78013
UniProt: A0A1D7QH69
LinkDB
Position
complement(3100863..3101429)
AA seq 188 aa
MRSYQTNSDLELVDLLKQDDRDAFAEMYRRHAHRLTDFASSKLYSLNDARDLIQDLFAGL
WADRNKIPVNTSLQSYLFASVRYKVIDKIRKNVTREEYAIIVQSLAMHSGHNPEKELEAK
ELRKIVDIAIEQLPPRTRAIYKLSRNEHQTISEIAEQLNLSDQTVKNQLTTAMKSLRETL
ERLSVLLL
NT seq 567 nt   +upstreamnt  +downstreamnt
atgcgatcttaccagaccaattcagatttggaacttgttgacttgctcaagcaggacgac
cgggacgcttttgccgaaatgtaccgcaggcatgctcatcggcttactgattttgcaagt
tcaaaactgtattcgttaaacgatgcaagagacctgattcaggacctcttcgccggttta
tgggcagaccgcaacaaaataccggttaacacttctctgcagtcttacttgtttgcctcg
gtacgctacaaggttattgataagatccgtaaaaatgttacccgggaagagtatgccatc
atcgttcagtcgctggccatgcatagcggtcataatccggaaaaagaactggaagcaaaa
gagctaaggaagattgtagatatagcgattgagcaactccctccccgcaccagagcaatc
tacaagctcagccggaatgaacatcaaaccatttcagagattgccgaacaacttaacctc
tctgatcagactgtaaaaaatcaattgacgacagcgatgaaatcccttagggagacactg
gaaaggctttctgtgctccttctttaa

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