Pedobacter steynii: BFS30_13005
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Entry
BFS30_13005 CDS
T04469
Name
(GenBank) hypothetical protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty
Pedobacter steynii
Pathway
psty02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BFS30_13005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psty03021
]
BFS30_13005
Transcription machinery [BR:
psty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFS30_13005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_11
UPF0122
PF0610-like_N
HTH_38
HTH_23
HTH_25
COMM_HN
WHD_BLACT
HTH_10
HTH_40
DUF8248
HTH_5
HTH_IclR
Bac_RepA_C
Motif
Other DBs
NCBI-ProteinID:
AOM78017
UniProt:
A0A1D7QH90
LinkDB
All DBs
Position
complement(3109486..3110079)
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AA seq
197 aa
AA seq
DB search
MQEGIDEEDTKQRCARGDRAAYALLYTFYYEPLYRHVFLFLKSKEETEEIVQDAFVKIWE
NRTSLPEVRNLKPYLYRVAKNLLLDHLRRLQTQNKVIRMASPQTEPLEDSTSDQINHKDY
LALSQEAIQHLTEKRRQIFLMRTQQELSLDEIAQELSISKSVVKKQLYAAITFVREYMHK
HGGIPAGLLILLLEALS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaggcatagatgaagaagacaccaaacaacgttgtgcacgtggagatagggca
gcctatgccctattgtataccttctactacgaacctctttaccgtcatgtattcttattc
ctgaaatcaaaggaagaaacagaagaaattgttcaggatgcttttgtaaaaatctgggag
aaccggacttctcttcctgaagtccggaatctgaaaccttatttataccgggttgccaaa
aatctgctactggatcatctcagaagactgcaaacccaaaacaaggtcatcagaatggcc
agcccacaaaccgaaccgctcgaagacagcacctcagatcagatcaatcataaagattat
ctggcgctctcccaagaggccatccagcatttaaccgaaaaaagaaggcagatattctta
atgcgtacccaacaggagctctctctcgatgagattgcccaggaactctctatttccaaa
tccgtagtaaaaaagcaactctatgccgccattacatttgtaagagagtacatgcacaaa
catgggggaatccctgccgggcttctgatcctgttactggaagccttatcataa
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