KEGG   Pedobacter steynii: BFS30_13005
Entry
BFS30_13005       CDS       T04469                                 
Name
(GenBank) hypothetical protein
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty  Pedobacter steynii
Pathway
psty02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psty00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BFS30_13005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psty03021]
    BFS30_13005
Transcription machinery [BR:psty03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BFS30_13005
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_ECF Sigma70_r4 HTH_11 UPF0122 PF0610-like_N HTH_38 HTH_23 HTH_25 COMM_HN WHD_BLACT HTH_10 HTH_40 DUF8248 HTH_5 HTH_IclR Bac_RepA_C
Other DBs
NCBI-ProteinID: AOM78017
UniProt: A0A1D7QH90
LinkDB
Position
complement(3109486..3110079)
AA seq 197 aa
MQEGIDEEDTKQRCARGDRAAYALLYTFYYEPLYRHVFLFLKSKEETEEIVQDAFVKIWE
NRTSLPEVRNLKPYLYRVAKNLLLDHLRRLQTQNKVIRMASPQTEPLEDSTSDQINHKDY
LALSQEAIQHLTEKRRQIFLMRTQQELSLDEIAQELSISKSVVKKQLYAAITFVREYMHK
HGGIPAGLLILLLEALS
NT seq 594 nt   +upstreamnt  +downstreamnt
atgcaagaaggcatagatgaagaagacaccaaacaacgttgtgcacgtggagatagggca
gcctatgccctattgtataccttctactacgaacctctttaccgtcatgtattcttattc
ctgaaatcaaaggaagaaacagaagaaattgttcaggatgcttttgtaaaaatctgggag
aaccggacttctcttcctgaagtccggaatctgaaaccttatttataccgggttgccaaa
aatctgctactggatcatctcagaagactgcaaacccaaaacaaggtcatcagaatggcc
agcccacaaaccgaaccgctcgaagacagcacctcagatcagatcaatcataaagattat
ctggcgctctcccaagaggccatccagcatttaaccgaaaaaagaaggcagatattctta
atgcgtacccaacaggagctctctctcgatgagattgcccaggaactctctatttccaaa
tccgtagtaaaaaagcaactctatgccgccattacatttgtaagagagtacatgcacaaa
catgggggaatccctgccgggcttctgatcctgttactggaagccttatcataa

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