KEGG   Pedobacter steynii: BFS30_15835
Entry
BFS30_15835       CDS       T04469                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty  Pedobacter steynii
Pathway
psty02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psty00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BFS30_15835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psty03021]
    BFS30_15835
Transcription machinery [BR:psty03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BFS30_15835
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 Sigma70_ECF HTH_24 HTH_AsnC-type HTH_23 HTH_Tnp_ISL3 HTH_Mga HTH_11 Trp_repressor GerE HTH_38 DUF8604 ARM_SRB8 UPF0122 DUF722 HTH_Crp_2 NirdL-like_HTH HTH_20 PF0610-like_N HTH_DeoR TFIIE_alpha HTH_28 HU-CCDC81_euk_2 DUF6376 Spiralin
Other DBs
NCBI-ProteinID: AOM78519
UniProt: A0A1D7QIT9
LinkDB
Position
3793037..3793624
AA seq 195 aa
MTIQNRLSDQELVALLKERNQAAFTEIYDRYWRIMYGHVYKMLLDEEESKDVIQELFSNL
WINSDRIPDQLNLPGYLYIMAKNKVLNLIRRNKFQTAYLNSLSDFITEASTATIDQLNER
DLAMAIEREIQSLPPRMKQVFELSRKENLSYKEIADRLGTSEETVKKQVHNSIKSIKHHL
KESGGAAVLLLTFLR
NT seq 588 nt   +upstreamnt  +downstreamnt
atgacaattcaaaacaggctttctgatcaggaactggtggctcttttaaaagagagaaat
caagctgcattcacggaaatctacgacaggtattggcggatcatgtatggtcatgtttat
aagatgctattggacgaagaggagtcaaaagatgtcattcaggaactatttagcaattta
tggatcaattctgatcgtattccggatcagttaaaccttccggggtacctgtatataatg
gcaaaaaataaggtactaaacttgatccgcaggaataagtttcagactgcctacctcaat
tctttgtcagattttatcacggaggccagtacggctaccatagatcagttgaatgaacgt
gatttggctatggccatagaaagagaaattcaaagtcttccgccaaggatgaaacaggtt
tttgaattaagcaggaaagagaacctttcctataaagagattgcagaccggctgggaacg
tcagaagaaaccgttaaaaagcaggtgcacaattctatcaaatctatcaaacatcacctg
aaggaatcaggcggagctgcagtgttattgctgacttttctacgctga

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