Pedobacter steynii: BFS30_17030
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Entry
BFS30_17030 CDS
T04469
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty
Pedobacter steynii
Pathway
psty02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BFS30_17030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psty03021
]
BFS30_17030
Transcription machinery [BR:
psty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFS30_17030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_11
HTH_24
SidM_Rab1-act
HTH_23
HTH_Crp_2
HTH_40
Sigma54_DBD
Sigma70_ECF
UPF0122
HTH_AsnC-type
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AOM80835
UniProt:
A0A1D7QQD8
LinkDB
All DBs
Position
4067654..4068232
Genome browser
AA seq
192 aa
AA seq
DB search
MITYTGLNDGELAILLQQGDRAAFTEIYSRYKYLLYLHAYKRLRNADEAEDIIHDLFAVL
WNNRDSFVLKTHLSGYLYTAVRNRIFKFMAHKDIESSYISSFFETAKNTVNITDHLVREN
QMAILIEKEIAALPLKMREIFEMSRKQHLSHKEIADQLQLSEQTVSKQVSNALRILKAKL
WFLTFLAFFIKP
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgataacttatacaggtcttaatgacggggaattggctattttactgcaacagggtgac
cgggctgcttttaccgagatttatagcaggtacaaatatcttttatacctgcacgcgtac
aaacgtttaaggaacgcagatgaagcagaggacatcattcatgatctttttgcagtgtta
tggaacaacagggacagctttgtcttaaagacacatctgtccggctatttatatactgca
gtgcgaaaccgcatctttaaatttatggcgcataaagacattgagtccagttatatttct
tccttttttgaaactgcaaaaaacacggttaacattacggatcacctggtccgggaaaat
cagatggcgattctgatcgaaaaggagattgcggcactcccattaaaaatgagagaaata
tttgaaatgagccgtaaacaacacctttcccataaagagatcgcggatcaattacagctt
tctgaacaaacggtctccaaacaagtcagcaatgctctccggattttaaaggctaaactg
tggtttttaaccttcctggccttttttattaaaccataa
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