KEGG   Pedobacter steynii: BFS30_17030
Entry
BFS30_17030       CDS       T04469                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty  Pedobacter steynii
Pathway
psty02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psty00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BFS30_17030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psty03021]
    BFS30_17030
Transcription machinery [BR:psty03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BFS30_17030
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 GerE HTH_11 HTH_24 SidM_Rab1-act HTH_23 HTH_Crp_2 HTH_40 Sigma54_DBD Sigma70_ECF UPF0122 HTH_AsnC-type HTH_10
Other DBs
NCBI-ProteinID: AOM80835
UniProt: A0A1D7QQD8
LinkDB
Position
4067654..4068232
AA seq 192 aa
MITYTGLNDGELAILLQQGDRAAFTEIYSRYKYLLYLHAYKRLRNADEAEDIIHDLFAVL
WNNRDSFVLKTHLSGYLYTAVRNRIFKFMAHKDIESSYISSFFETAKNTVNITDHLVREN
QMAILIEKEIAALPLKMREIFEMSRKQHLSHKEIADQLQLSEQTVSKQVSNALRILKAKL
WFLTFLAFFIKP
NT seq 579 nt   +upstreamnt  +downstreamnt
atgataacttatacaggtcttaatgacggggaattggctattttactgcaacagggtgac
cgggctgcttttaccgagatttatagcaggtacaaatatcttttatacctgcacgcgtac
aaacgtttaaggaacgcagatgaagcagaggacatcattcatgatctttttgcagtgtta
tggaacaacagggacagctttgtcttaaagacacatctgtccggctatttatatactgca
gtgcgaaaccgcatctttaaatttatggcgcataaagacattgagtccagttatatttct
tccttttttgaaactgcaaaaaacacggttaacattacggatcacctggtccgggaaaat
cagatggcgattctgatcgaaaaggagattgcggcactcccattaaaaatgagagaaata
tttgaaatgagccgtaaacaacacctttcccataaagagatcgcggatcaattacagctt
tctgaacaaacggtctccaaacaagtcagcaatgctctccggattttaaaggctaaactg
tggtttttaaccttcctggccttttttattaaaccataa

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