Pedobacter steynii: BFS30_18315
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Entry
BFS30_18315 CDS
T04469
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psty
Pedobacter steynii
Pathway
psty03030
DNA replication
psty03430
Mismatch repair
psty03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BFS30_18315
03430 Mismatch repair
BFS30_18315
03440 Homologous recombination
BFS30_18315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psty03032
]
BFS30_18315
03400 DNA repair and recombination proteins [BR:
psty03400
]
BFS30_18315
Enzymes [BR:
psty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BFS30_18315
DNA replication proteins [BR:
psty03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BFS30_18315
DNA repair and recombination proteins [BR:
psty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BFS30_18315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DUF7508
GIY_YIG_2
Rv2179c-like
R2K_2
Motif
Other DBs
NCBI-ProteinID:
AOM78951
UniProt:
A0A1D7QJV1
LinkDB
All DBs
Position
4434034..4435404
Genome browser
AA seq
456 aa
AA seq
DB search
MLYAVVDIETTGGYASGNGITEIAILIHDGVSVVNSFETLINPKQYIPDHIEALTGISND
MVENAPVFAEVASEIYDLLHDKVFVAHNVNFDFSFIRHQLGEAGYDLQCNKLCTVRLSRK
ILPGHKSYSLGKLCAALKISLNNHHRAGGDAKATAELLSMLLQNDTEGIIHQSLKITSKE
QALPPNLSKSKIDQLPQNPGVYYFKDQKGKVIYIGKAKSLKKRVCSHFSGNNAGKQRQDF
LKNIYSVDFEVCGTELMAFILEATEIKRLWPENNRALKRYEQKYALYSFEDQKGYLRLGI
DTFKKNLPVLYSFNTILEGHHLLKILIKDHFLCEKLCYIQKNRMACTGHEEGNCSGACVG
KESAPAYNVRVKYAIAQLKSMLPSFAIIDAGRTEDEQSCILVEQGKLYGMGYISQYSDVQ
EPELLKSALKAYPSNDYIMHLILTHTEQHPHKRIAV
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgctgtacgctgttgtagatatagagaccaccggtggttatgcctcaggaaatggaatt
acggaaattgcaatcctgattcatgatggggtatcagtggtcaattcatttgaaacactg
attaatccgaagcaatatattcccgatcatattgaggctttaacaggaatcagcaatgat
atggttgaaaatgcccctgtatttgcagaggtggcttcagaaatctacgatttgcttcat
gataaagtgtttgtagcccacaatgtgaatttcgatttttcttttatccggcatcagctt
ggtgaagccggatatgatttacaatgtaataaactgtgtacggtaaggctgagccgtaaa
atattgccaggtcataaatcctatagtctgggtaagctatgtgctgcattaaaaatttca
ttgaacaaccaccacagggcggggggagatgcgaaggctactgcggaattgttgagcatg
ctgctacagaacgatacggaaggcatcatccatcaatcccttaaaattacttcgaaagag
caggcattgccccctaatttatcgaaatccaagatcgatcagctaccccagaatccgggg
gtctattattttaaagatcagaaaggaaaggtcatttatatcggaaaagcgaaaagctta
aagaaaagagtgtgttcccatttcagtggaaataatgcaggtaagcaacgtcaggatttc
ctgaagaacatttatagtgtggattttgaagtgtgcggaacagaattgatggctttcatc
ctggaggcgacggaaatcaaaagactatggccggaaaataaccgggcattgaaacgttac
gaacaaaagtatgctttgtattcttttgaagaccagaaaggttacctccgattgggaatt
gatacgttcaagaagaacttaccggtattgtatagtttcaatacgattcttgaagggcat
caccttttaaagatcctgataaaagatcattttctatgtgaaaagctgtgttatattcag
aaaaacagaatggcctgtactggtcatgaggagggtaattgcagtggggcatgtgtgggt
aaggaatctgctcctgcctataatgtgcgggttaaatatgcaattgcgcaactgaaatct
atgcttccgagcttcgccattatagatgcaggaagaacggaggatgagcagagctgtatt
ttagtggagcagggtaaattatatggaatggggtatatatctcagtactcagatgttcag
gagcctgagctcctgaaatctgctttaaaagcttatccttcgaatgattacatcatgcac
ctgattctgacgcatacggaacaacacccgcataagcgaatcgctgtttaa
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