Pedobacter steynii: BFS30_18885
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Entry
BFS30_18885 CDS
T04469
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
Organism
psty
Pedobacter steynii
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Paralog
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
CarboxypepD_reg
STN
TTR_TEN1-4
MetallophosN
FliB_C
Motif
Other DBs
NCBI-ProteinID:
AOM79053
UniProt:
A0A1D7QKB4
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Position
4562281..4565838
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AA seq
1185 aa
AA seq
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MNKKRFVALIITAMRISVSQIFLVILFTCSTFAKKVEAQGILNKEISINITEGKIKQILK
EIQNQTKVKFIYSPSVIKSERIVSLNVVNKRLGDILTETLAALNITYRVVDQHILLYDKA
GFAAAEAEAQKPQTIIKGQVSSVRGETLPGVSVKIKGTATGAMTDNNGNYSITTTSADAI
LVFTYIGFKTKEVAVAGKTIINVQLEEEETSLGEVVVVGYSTQKKKDLTGAVAVVNVSSM
VKQPVSSVNNLLQGQASGVTVLGSGQPGEEPQVKIRGINTFGNNSPLYIVDGVPTQSTSD
INPNDIESAQVLKDAGAASIYGSRAANGVIVLTTKRGKGKTQVNYDAYYGSQRPKTGNVW
DILNPAEMATLKRQMLINSGETNLNDPLYGNGPSYVVPDYILPRGAMEGDPRTNPSLYNI
KPFFNAAEYADFYRITRANKNGTNWYEEIFSPAPITSHNVSVSGGSDQGNYLFSANYFNQ
EGTLLKTFLTRYTIRSNTQYNIGKKIRVGENLAYSLKSNPQIGGLTGDNAIGHAFRQQPI
IPVYDIMGNYGGSFGGGLGDAYNPVAMMMRTKDNKATDNRLFGNVFVEVDLPESLTLRSS
FGGSNYSGDSRSFVHPQYENSENNITNTYSESSYAGFDYTWTNTLAFNRTFGKHTLKALA
GTEYLRNRNNTLSGSNKGYFSFDPNYTNLNTGSGPKDSSSEREASAMFSLIGRLDYSFND
KYLIGGTIRRDGSSKFTENVYGWFPSVSGGWRISQESFLKDVKWITDLKIRGGYGVMGNQ
LNVTSGNGFSTYSSAIAPSYYAIGGGNNVVSGFYRNRTGNPGAEWERNTNSNIGVDATLF
AGKLEISADYYRKVINKLLYNPEMIGTGGASSVPFINIGEMKNDGLDLAISTHTNIGSEL
KFNATATLTTYNNLIKKISGDADYFDEDSRRFDGSMIIRNQVGHSVSQFFGYKVAGFWNS
QPEIDAANLKAQGATGDPNSVYQSAIGLGRFKYEDMNGDGIITAADRTFLGNANPNFSYG
LNLGLTYKDFDLSMFFYGVQGNSIWNQVKWWTDFSSSFGGAKSHTALYDSWTENNKNAKA
PIQEKEQNFSSNSVPNSYFVEKGSYLRLKNAQIGYTFPAAMLQKIGVGKLRVYVSGANLF
TITKYSGLDPEIGTSSATGSQTAYGVDEGAYPSQRTFLFGLNLNF
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaagcgatttgttgctttaataataacagcaatgagaatatctgtaagccaa
atttttcttgtcatcttattcacctgcagtacttttgcaaaaaaagtagaggcacaggga
attctgaacaaagaaatttctataaatattactgaaggtaaaataaagcagatcttaaag
gaaattcaaaaccagactaaggtaaaatttatttatagcccatctgtaatcaaatccgaa
aggattgtcagtctaaatgtcgtgaataagcgcctgggggatatccttacggaaacactt
gccgcccttaacatcacttacagagtggtggatcagcacattttactatacgacaaagca
ggttttgcagcggctgaagccgaggcgcaaaaaccacagaccattatcaaaggacaggtg
agctcggtaagaggagaaacccttcccggagtcagcgtaaagatcaaaggaacggctacc
ggtgcaatgaccgacaacaatggtaattactcaattacgacaacttctgcagatgccatt
ctggtttttacttatattggttttaagactaaggaagtcgcagttgccggtaagacaatc
atcaatgtccagctggaagaagaagaaacctcattgggcgaggtggtcgtagtaggttat
tccacccagaagaaaaaggacctgaccggtgctgttgcagttgtcaatgtctcttccatg
gtcaaacaacctgtttcttcggtaaacaacctcttgcaggggcaggcttcaggagtaacg
gtattgggatcaggacagcctggagaagagcctcaggtaaaaataagggggatcaatact
tttggaaacaatagcccactttacattgtagatggtgttcctacccaaagcacttccgac
atcaatccgaatgacatagaatctgcacaggtattgaaagatgccggggctgcttcgatt
tatggatcaagggccgcgaacggcgtaatcgtcctgaccaccaaaagaggtaagggaaaa
actcaggtcaactatgatgcttattatggtagtcagcgtcctaaaaccggaaatgtatgg
gatattttaaaccctgcagagatggccacactgaaacgtcagatgctgatcaactccgga
gaaacaaatctgaatgaccccttgtatggaaatggtccttcctatgtcgtacctgattat
attcttccgcgtggagcaatggaaggagatcccagaactaatccttctttatacaatatc
aaaccgtttttcaatgctgcggagtatgctgatttttatcgcatcacacgtgccaataaa
aatggaaccaactggtatgaagagatctttagtccggcaccgattaccagccacaacgtt
tccgttagtggtggttcagatcagggaaattaccttttctcggccaattattttaaccag
gaaggaacgttacttaaaactttcctgaccaggtataccatccgctcaaatacccagtac
aatattggtaaaaagatcagggtaggtgaaaaccttgcctattccctgaagagcaatcct
cagattggagggttgactggtgataatgcaatcggacatgcttttcgtcagcagccgatc
attcctgtatatgatatcatgggcaattatggtggttcttttggaggaggattaggcgat
gcctataacccggtggctatgatgatgcgcacgaaagacaataaagccacagacaacagg
ttgtttggaaatgtttttgtagaggtggacctgccggaatcactgacactgcgcagttca
ttcggtggttccaattattcaggggattcccgttcatttgttcatccacaatatgaaaac
tcggaaaataacatcaccaatacctattctgagtcttcttatgcgggatttgattatacc
tggacaaacacccttgcctttaacagaacatttggtaaacatactttaaaggcattggca
ggtacggaatacctgagaaaccgcaacaatactttaagcgggagtaacaaaggttatttc
tctttcgatcccaactataccaatctgaataccggtagcggacctaaggattcttccagt
gaacgtgaagcaagtgctatgttttctcttatcggtcgtttggactatagcttcaacgat
aaataccttatcggaggaacaatcagacgcgatggatcatccaaatttacggaaaacgta
tatggctggttcccttcagtaagcgggggatggagaatttcgcaggagtcttttttaaag
gatgtcaaatggattaccgacctgaagatcagaggtggatatggagtcatggggaatcag
ctgaatgtaaccagcggaaatggattcagtacttatagcagtgcaattgccccatcttat
tatgcaataggaggaggaaacaatgttgtttccggtttctatagaaaccgtaccggtaat
ccgggagcggagtgggaaagaaataccaactccaacatcggtgtcgacgcgactctattt
gcgggaaaactggaaatttctgcagactactatcgcaaggtcatcaataagttattgtac
aatcctgaaatgatcgggacgggaggtgcttcctccgtgccttttatcaatattggcgag
atgaagaacgatggattagacctggcaatttcaacccataccaatatcggaagcgagctt
aaattcaatgcaacggcaacccttaccacttataataacctgattaaaaagatttccggt
gatgcagattattttgatgaagattcacgtcgctttgatggtagtatgattatccgtaat
caggtaggtcattccgtgagtcagttttttggttataaagtggccggattctggaattcc
caaccagagattgatgctgccaatttaaaagcacaaggtgcaaccggagatcccaattct
gtttatcagagtgcaataggtctcggacgttttaaatatgaagacatgaatggggatgga
atcatcacggcggccgaccgtactttcttaggaaatgccaacccgaactttagttatgga
ctgaaccttggtttaacctataaagatttcgacctgagcatgtttttttatggggttcag
ggcaattcgatctggaatcaggtaaaatggtggacggatttttcttcttctttcggaggg
gcaaaaagccataccgctttgtacgattcctggacggaaaacaataaaaatgcgaaggca
ccaattcaggagaaagaacagaattttagctcgaacagtgtccctaactcgtatttcgta
gaaaagggctcctacctcagattgaagaatgcacagatcggatatacattcccggcggca
atgcttcagaaaatcggcgtgggtaaactccgggtttatgtatccggagccaacttgttt
acgattaccaaatattcaggactggatcctgagattggtacttcaagtgccactggtagc
cagaccgcctacggggtagatgagggcgcttatccaagtcagcggactttcctgttcgga
ttaaatttaaatttttaa
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