Pedobacter steynii: BFS30_21245
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Entry
BFS30_21245 CDS
T04469
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty
Pedobacter steynii
Pathway
psty02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BFS30_21245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psty03021
]
BFS30_21245
Transcription machinery [BR:
psty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFS30_21245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
HTH_24
Fe_dep_repress
DUF1572
HTH_10
HTH_38
HTH_Crp_2
HTH_23
Sigma70_ECF
HTH_Tnp_ISL3
MarR
I-HmuI_NUMOD-like
HTH_11
DUF7123
HTH_40
FlhC
HTH_5
MarR_2
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AOM79463
UniProt:
A0A1D7QLH5
LinkDB
All DBs
Position
5156910..5157485
Genome browser
AA seq
191 aa
AA seq
DB search
MANYSTCTDNELIALWKEGNDAVFREIYLRYDKLLYLYAYKKLRNREESKDVVQDSFTWL
LNHRNELHLHTSLSGYLYKTVLHQILDIFKHKGIIKKYAESGEHYIEVNSPEADYLIREK
DIAALIENEIAAMPPKMREIYTLKRREFLSTKEIAGQLGLSAHTVSTQLKRAMKHLKVKL
GTVVFILWILS
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atggccaattatagcacctgtactgataacgagttgattgctttatggaaagaaggtaat
gatgccgtatttagagaaatttatctgcgatacgataagctgctatacttatacgcttat
aaaaaactcagaaacagagaggaatcaaaagatgtggtacaggattcttttacctggctt
ttaaatcaccgcaacgagcttcatctccataccagcttatccggatatctttataaaacc
gtccttcatcagattctggatatctttaaacataaaggcatcattaaaaaatatgcggaa
agcggggagcactatatcgaagttaattctccggaagcagattacctgatccgggaaaaa
gatatcgccgccttaatagaaaatgaaattgccgccatgcctcctaaaatgagggaaatc
tatactttaaaaagaagagagtttttaagcaccaaagaaatcgcaggacaattagggctc
tctgcacatacggtatctacccagcttaaaagagcaatgaagcacctgaaggtaaaactt
gggacggtagtgttcattctatggattctttcctaa
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