KEGG   Pedobacter steynii: BFS30_21245
Entry
BFS30_21245       CDS       T04469                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty  Pedobacter steynii
Pathway
psty02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psty00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BFS30_21245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psty03021]
    BFS30_21245
Transcription machinery [BR:psty03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BFS30_21245
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 GerE HTH_24 Fe_dep_repress DUF1572 HTH_10 HTH_38 HTH_Crp_2 HTH_23 Sigma70_ECF HTH_Tnp_ISL3 MarR I-HmuI_NUMOD-like HTH_11 DUF7123 HTH_40 FlhC HTH_5 MarR_2 HTH_AsnC-type
Other DBs
NCBI-ProteinID: AOM79463
UniProt: A0A1D7QLH5
LinkDB
Position
5156910..5157485
AA seq 191 aa
MANYSTCTDNELIALWKEGNDAVFREIYLRYDKLLYLYAYKKLRNREESKDVVQDSFTWL
LNHRNELHLHTSLSGYLYKTVLHQILDIFKHKGIIKKYAESGEHYIEVNSPEADYLIREK
DIAALIENEIAAMPPKMREIYTLKRREFLSTKEIAGQLGLSAHTVSTQLKRAMKHLKVKL
GTVVFILWILS
NT seq 576 nt   +upstreamnt  +downstreamnt
atggccaattatagcacctgtactgataacgagttgattgctttatggaaagaaggtaat
gatgccgtatttagagaaatttatctgcgatacgataagctgctatacttatacgcttat
aaaaaactcagaaacagagaggaatcaaaagatgtggtacaggattcttttacctggctt
ttaaatcaccgcaacgagcttcatctccataccagcttatccggatatctttataaaacc
gtccttcatcagattctggatatctttaaacataaaggcatcattaaaaaatatgcggaa
agcggggagcactatatcgaagttaattctccggaagcagattacctgatccgggaaaaa
gatatcgccgccttaatagaaaatgaaattgccgccatgcctcctaaaatgagggaaatc
tatactttaaaaagaagagagtttttaagcaccaaagaaatcgcaggacaattagggctc
tctgcacatacggtatctacccagcttaaaagagcaatgaagcacctgaaggtaaaactt
gggacggtagtgttcattctatggattctttcctaa

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