KEGG   Pedobacter steynii: BFS30_21380
Entry
BFS30_21380       CDS       T04469                                 
Name
(GenBank) hypothetical protein
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty  Pedobacter steynii
Pathway
psty02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psty00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BFS30_21380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psty03021]
    BFS30_21380
Transcription machinery [BR:psty03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BFS30_21380
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 DUF722 HTH_23 HTH_24 Sigma70_ECF UPF0122 GerE DUF2774 HTH_28
Other DBs
NCBI-ProteinID: AOM79485
UniProt: A0A1D7QLD8
LinkDB
Position
complement(5188927..5189469)
AA seq 180 aa
MLGEDRGALNIDDFEVLFRKNHKFLCLIAMDYVHDQFIAEDLVQEFFINYWQRRDLINLT
TSFEAYARRAIKYKSIDYLRKTAIAEKRNTELTILEEQQVILDQEEDLDLQHQRYIKIIE
MIQSLPPDRRKIFMLHAMDKLSYAQIAEKQSISINTVKTQLKRAYNALRTKTLALLMSIL
NT seq 543 nt   +upstreamnt  +downstreamnt
atgctgggggaagatcggggcgcactcaacattgatgattttgaagtactatttcgcaag
aatcacaaattcttgtgcttgattgctatggactacgtccacgatcaattcattgctgaa
gatctcgtccaggaattcttcatcaactactggcaaagacgcgaccttataaaccttacc
accagctttgaagcctatgcccgcagagcaataaaatacaaaagcatcgactatctccgt
aaaacggccatcgcagaaaagcgaaacactgaactaaccatactcgaagaacaacaagta
atcttagaccaagaagaagatctggatcttcaacaccaacgctacataaaaatcatcgag
atgatccagtctctcccacccgatcgcagaaagatttttatgctccatgcaatggacaaa
ctcagctacgcccagatcgccgagaaacaaagtatttccatcaacaccgtaaaaactcaa
ctaaaaagagcatataacgcattacgaaccaaaactcttgctttacttatgagtattctg
taa

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