Pedobacter steynii: BFS30_22010
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Entry
BFS30_22010 CDS
T04469
Name
(GenBank) hypothetical protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
psty
Pedobacter steynii
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psty02000
]
BFS30_22010
Transporters [BR:
psty02000
]
Other transporters
Pores ion channels [TC:
1
]
BFS30_22010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
AOM79594
UniProt:
A0A1D7QLP6
LinkDB
All DBs
Position
complement(5321410..5324535)
Genome browser
AA seq
1041 aa
AA seq
DB search
MSKKNLIGLSKKGIGLVCCLCFLSSFIYAQNLKITGRVTDLSDGGALPGVSVKVKNTTTG
TVTNTGGAFALEAPKGAILVFSYIGYASKELTIADNNPLNVALSAQNDQLSEVIVIGYGT
TQKKDLTGSVSSISASQIKDLPVSSIDQKMVGQIAGVQISTPTGAPGGGVNIQVRGAGSI
GATNSPLFVVDGFAISNTGGQSYNPLNVLSPDDIESVTVLKDASSTAIYGSRGSNGVIVI
TTKKGKTGAPVVNVNSYIGSQQVPQKGRPKVLNGTEYAQYRRDIITDDFASRGLVATDND
IPAEFRNPAQYGEGTNWYDAVLRTAMQNSVDASIRGGNEHTKYSASVNRLEQDGTVRYTD
YKRYSLNFNLQSDLSKKIKVGISLAPSGGTQHRSGFESGQRDVLTRALWLSPLVPITDAS
GKRTVFITSPGAIGAGNPLNTLEFSGTKANYFRGLATAFAEYQIIDGLKAKYSYNLDYTN
NSSFAFSPTFVIGETGNQKPNLSIPGSNTAQNTTTNWLSELTLGYDKSFGKDHRINAIIG
YTAQQERYNGYSFGATNYPDDLIQTINASTLLNGAAAGVEKWSLISYLARVNYTLKDKYI
LTGTIRSDGSSRFGSSVRYGTFPSGAFAWRASEEEFLKNVKWISDLKLRTSYGRTGNFNI
GNYSYASGIGSANYSFGGQLANGRASGSIANENLTWEKSDEFDLGLDFSVFKSRLNLTAD
FYNRITSSLLLNVELPLASGYSSATVNLGKVRNRGFEFGLTSKNLTGAFTWNTNFNISFN
RNIVLELNPGNNNSPIYSGRSGEGNYTHISQVGKPLGQFFGFVFDGIYQNAAELAGQPKH
NSSIVGSVRYKDIDGNGVIEAVKDFTVIGNSQPDFNYGITNSFGYKDFDLTVLIIGSQGG
QIMKTGNEFLTNIDGVFNVDRKVLNRFRSPSNPGDGRVPTTVNGRTLYREVNSQWIEDAS
FMRIQNITLGYNFNQKFISSSGVIKALRLYGSIQNLATFSKYSGSNPQASTNDGFSVLTP
GRDFTSYPLPRVITAGINMTF
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaaaatctaatcggtctatctaaaaaaggaataggcctggtgtgctgtctg
tgtttcctcagcagcttcatctatgcacaaaatttaaaaattacgggaagggtgacagac
cttagcgatggaggagcgcttccaggcgtatccgttaaagttaaaaacaccacaacggga
acggtaaccaataccggcggggcatttgcgctggaagcacccaaaggagcaatccttgtt
ttcagctatattggttatgcgagcaaagaattaaccatagcagacaacaacccgctaaat
gtggcgctttctgcacagaatgaccagttgtctgaggtgatcgtgatcggttatggtacg
actcagaaaaaggacctgaccggctccgtttccagcatttcagcctcgcagatcaaagac
ttgccggtaagctccatcgaccagaaaatggttggacaaattgccggtgttcaaatcagc
acgcctaccggtgcgccgggtggtggcgtgaacatacaggtcagaggtgccggctccatc
ggtgcaaccaacagccctttatttgtggtggatggcttcgcgatctccaacaccggaggt
cagagctataacccactgaacgtccttagccctgatgatattgaatctgttactgtttta
aaagacgcttcttccaccgcaatatatggatcaagaggctcaaacggcgtgattgtcatc
accacaaaaaaaggaaaaacaggcgccccggtcgtgaatgtaaacagctatatcggtagt
cagcaggtccctcaaaaaggcaggccgaaagtccttaacggcacagaatatgcacaatac
agaagagatatcattaccgatgactttgcttccagaggtttggtggccactgataatgat
attcccgcagaattcagaaaccctgctcaatacggtgagggcacgaactggtatgatgcg
gtgttgcgtacagcaatgcaaaacagtgtggatgccagcatcagaggcggaaatgagcat
accaagtattccgcttctgttaacagactggagcaggatggaacagtgaggtatacagac
tataaacgttactccctgaatttcaaccttcaatccgacctgagtaaaaaaattaaagtg
ggcattagccttgcgccaagtggtggcactcagcaccggagtggatttgagtccggacaa
agagacgtactgacccgtgcactttggcttagtccacttgttccgattacggatgcatct
ggaaagagaacggtctttatcacctcccctggcgctattggggcaggaaaccccttaaat
accctggaattttcgggcactaaagccaattatttcagaggccttgccactgcctttgcc
gaatatcagatcattgatggtttaaaagcaaaatatagctataaccttgattataccaac
aacagttcctttgcattcagccctacctttgtgattggcgaaacgggaaatcaaaaacca
aacctctctattcccggttccaatacggcacagaataccactacgaactggctttcagaa
ttaacccttggttacgataaaagctttggaaaagaccaccgcatcaacgcaattatagga
tatacggcacagcaggaacgttacaacggctattcttttggggcaacaaattatcccgac
gacctgatccaaaccattaatgcttccactttactcaatggagcagcagcaggagtagaa
aaatggtcgctcatctcctaccttgcccgcgtaaactatactcttaaagacaagtatata
cttaccggtaccattcgttctgatggttcttcgcgttttggttcgagtgtccgttatgga
acatttccatcgggggcatttgcctggagggcttctgaagaagagtttcttaaaaacgta
aaatggatcagcgacctgaagttaagaacgagttatggccgtacaggtaactttaacata
ggcaattattcctatgcctcaggaataggatcagcaaattattcctttggcggacaactt
gccaatggccgtgcttcaggatcgatcgcaaacgaaaacctgacctgggaaaaatcagat
gaatttgatctgggtctggacttctctgtttttaaaagcagattgaatctcactgcagat
ttttataaccgaattaccagctccctgcttttaaatgttgaacttccgcttgcctcagga
tattcttctgctacggtaaaccttgggaaagtgagaaaccggggttttgaatttggactg
acttccaaaaatctgaccggtgcatttacctggaatactaatttcaacattagctttaac
cgcaatattgttttagaacttaacccaggcaataacaattcccctatttatagcggtcgt
agcggagaaggtaattatacccatattagtcaggttggaaaaccgctgggacaatttttc
ggatttgtatttgatggtatttaccaaaatgcagctgaacttgccggtcagccgaaacac
aattcttccatcgtaggatcagtaagatataaagatattgacggcaatggtgtgattgag
gcagttaaagatttcacggttatcggaaattcgcagcctgatttcaactacggaatcacc
aacagtttcggttacaaggattttgatctgacggtcctgatcatcggttcacagggtgga
cagatcatgaaaaccggaaatgaattcttaacaaatatcgacggcgtgttcaatgtggat
cgtaaggtattaaacagattcagatcgccgtcaaaccctggagatggtcgtgtgcctacc
acagtaaatggcagaacactttatcgggaagtcaactcgcaatggatagaagatgccagt
tttatgcgcatccagaacatcaccctgggttataatttcaatcaaaaattcatcagcagt
tccggggttataaaggcgcttcgcttatatggcagtatacagaacctggccacattcagt
aagtatagcggttcgaatcctcaggcaagcaccaatgatggtttttctgtgttgactccg
ggacgtgattttaccagttatccgctaccaagggtcattactgccggaattaatatgact
ttttaa
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