Pedobacter steynii: BFS30_22545
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Entry
BFS30_22545 CDS
T04469
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
psty
Pedobacter steynii
Pathway
psty02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BFS30_22545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_12
Big_6
Big_3_3
A2M_BRD
Y_Y_Y
Big_3_5
Big_10
PKD
Motif
Other DBs
NCBI-ProteinID:
AOM79692
UniProt:
A0A1D7QLZ5
LinkDB
All DBs
Position
complement(5455252..5460627)
Genome browser
AA seq
1791 aa
AA seq
DB search
MSKSVKQIIKHIIMRYLKTIILLWVSILACLTANAQSANSHTASAGGGTGALPGGSTVDF
TVGEAIISTIGTNPIFTQGLHQTLLFLGVTNVSSTNTVTLYKEGGVINVTITFDQPVFVT
GNPELALNSGGKAIYASGSGTNTLNFTYTVAAGETSADLDYTAINSLTLAGGSTIQNAMG
ANAALTLPAPGAAGSLGANKDFVIDTTAPNAPSTPVMATASDSGVSNSDNITNVTIPVFT
GTAEAGSTVTLYDTDGTTVLGTGVATGGNWSITATTMTEGAHTLTAKATDAAGNEGLASA
GLVVTIDATAPTLAITSDVPQLKAGETATITFTFSEDPGTTFAWDGTTGDVVVTGGTLGA
ISGSGLTRTATFTPTPASSGTASITVAAATYTDAAGNDGGAGITPALIFDTVIPNAPSAP
VLATASDSGISNSDNITNVTIPVFTGTAEAGSTVTLYDTDGTTVLGTGVATGGNWSITSS
VLAPGVHTVTAKATDAVGNESPASAGLAVTIDTTAPTLAITSDVPQLKAGETATITFTFS
EDPGTTFAWDGTTGDVVVSGGTLGAISGSGLTRTATFTPTPASSGTVSITVAAATYTDVA
GNDGGAGSTPALTFDTSVPNAPSAPVLATASDSGVSNSDNITNVTIPVFTGTAEPGSTVT
LYDTDGTTVLGTGIATGGNWSITSSVLTPGVHAVTAKATDAVGNESPASAGLVVTIDTTA
PTLAITSDVPQLKAGETATITFTFSEDPGTTFAWDGTIGDIVITGGTLGAISGSGLTRTS
TFTPTPASSGTVSITVAAATYTDVAGNDGGAGTTPALTFDTAIPNAPSTPVLATASDSGI
SNSDNITNVTTPVFTGTAEPGSTVTLYVTDGTVAGTSVIGTGIATAGNWSITSSTLIPGA
RTIIAKATDAIGNISPASSGLIVTIDTTAPTLAITSDVPQLKSGETANITFTFSEDPGTT
FAWDGTTGDVVVSGGTLGAVSGSGLIRTATFTPTPASTGTASITVAAATYTDVAGNDGGA
GSTPALTFDTSVPNAPSAPVLATASDSGISNSDNITNVTTPVFTGTAEPGSTVTLYDTDG
TTVIGTGIATGGNWSITASTLTPGTHTITAKATDAVGNESPASAGLAVTIDTTAPTLAIT
SDVPQLKSGETANITFTFSEDPGTTFAWDGTTGDVVVTGGTLGAISGSGLTRTATFTPTP
ASSGTVSITVAAATYTDAAGNDGGAGTTPALTFDTQSPNAPSAPVLAAASDSGISNSDNI
TNVTTPVFTGTAEPGSTVTLYDTDGTTVIGTGIAIGGNWSITASTLTPGTHTITAKATDA
VGNESPASAGLAVTIDTTAPTLAITSDVPQLKSGETANITFTFSEDPGTTFAWDGTTGDV
VVSGGTLGAISGSGLTRTATFTPTPASSGTVSITVAAATYTDAAGNDGGAGTTPALTFDT
QSPNAPSAPVLAAASDSGISNSDNITNVTTPVFTGTAEPGSTVTLYDTDGTTVIGTGIAT
GGNWSITASTLTPGTHTITAKATDAVGNESPASAGLAVTIDTTAPTLAITSDVPQLKSGE
TANITFTFSEDPGTTFAWDGTTGDVVVTGGTLGAISGSGLTRTATFTPTPASSGTVSITV
AAATYTDAAGNDGGAGTTPALTFDTQSPNAPSAPVLAAASDSGISNSDNITNVTTPVFTG
TAEPGSTVTLYDTDGTTVIGTGVAAGGNWSITASTLTPGTHTITAKATDAVGNESPASAG
LAVTIDTTAPTLAITSDVPQLKSGETANITFTSVKIREQLLPGTELPVMSW
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaaatcagttaagcagatcattaaacatattatcatgagataccttaaaacaatt
atattgttatgggtttcgattttggcttgcttaacagcaaatgctcaatctgcgaatagc
catacagccagtgccggaggtggcacgggcgcattgcccggagggagtactgtggatttt
actgtcggagaagcaatcatctccacaattggaaccaatccaatattcacccaggggcta
caccagaccctgttattcctcggagtaactaatgtcagctctacaaacacagtcaccctt
tacaaagaaggaggagtcattaatgtgaccattacatttgaccagcctgttttcgtaacc
gggaatcctgagcttgccctgaatagtggcggtaaggccatttatgcctcaggcagtgga
accaatacccttaattttacttatacagtagctgccggtgagacttcagcagatctggat
tataccgcgattaattccctgacacttgcaggaggcagtacgattcagaatgcaatgggc
gccaatgcagcattaaccttacctgcacctggtgcagccggttctttaggcgcaaataaa
gatttcgtcattgacactaccgcaccaaatgcaccatctacacctgttatggctacggcc
agcgacagtggagtttcaaattcggataacattaccaatgtcactattccggtatttaca
ggtaccgcagaagctggatcaaccgtaacgctatatgataccgacggcacaaccgtattg
ggaaccggtgtagctaccggtggaaactggtctattacagcgactacgatgaccgaaggg
gcacatacactgacagcaaaggctacagatgccgcaggcaatgaaggcctggcttcagcc
ggacttgtagtaaccattgacgccaccgcccctactctggccatcaccagtgatgtgcca
caacttaaagcaggggaaacagcaaccatcacttttacctttagtgaagatccgggaaca
acttttgcctgggacggaactacaggtgatgtcgtggtaaccggaggaacactcggagcc
atatctggttctggtttaacccgtaccgcaacctttacaccgacaccggcaagctctgga
acggcaagcattactgtagctgcagcaacctacaccgatgcagcaggtaatgacggtggc
gcaggaataacccctgcactgatcttcgatacggtcattccaaacgccccgtctgcgcca
gtattagctacagccagtgatagtggaatatcgaattcagataacatcaccaatgtgacc
atccctgtatttacaggtaccgcagaagctggatcaaccgtaacgctatatgataccgac
gggacaactgttctgggaactggtgtagctaccggtggaaactggtctatcaccagctcc
gttctggctcctggagtacatacagttaccgccaaagcaactgatgcggtgggtaatgaa
agcccggcttcagctggactggcagtaactattgataccactgctcctactctggccatc
accagtgatgtgccacagctaaaagccggggaaacagcaaccatcacctttaccttcagt
gaagatccgggtacaacttttgcctgggatggaactactggtgatgtcgtggtaagcgga
ggcacacttggagccatatccggttctggtttaacccgtactgcaacctttacgccaact
ccggcgagctccggaacggtaagtattactgtagcagcagcaacttacactgatgtagct
ggtaatgatggcggagcaggaagcactcctgcactgacctttgatacttccgttccaaat
gctccgtctgcgccagtattggcaacagcaagcgacagtggagtatctaattcagataac
attaccaatgtcaccattcctgtatttacaggtaccgcagaaccaggatcaaccgtaacg
ctatatgataccgatgggacaactgttcttggaaccggtattgctaccggtggaaactgg
tccatcaccagctccgttctgactcctggagtacatgcggttaccgctaaagcaactgat
gcggtgggtaatgaaagcccggcttcagcaggactggtagtaactatagatactactgct
ccaaccttggccatcaccagtgatgtgccacaacttaaagcaggggaaacagcaaccatc
acctttaccttcagtgaagatccgggtacaacttttgcctgggatggaactatcggtgat
atagtaataaccggaggaacactcggagccatatctggttctggtttaacccgtacctca
acctttacaccaactccggcgagttccggaacagtaagcattactgtggcagcagcaact
tatactgatgtagctggtaatgatggcggcgcaggaacaacccctgccctgaccttcgat
acagccattccaaatgccccatctacgcctgttctggctacagcaagtgatagtggaata
tctaattctgataacattaccaatgtcaccacacctgtatttacaggtaccgcagaacca
ggttcaacagtaacactttatgttactgacggaacagtcgctggtacaagcgtaatcgga
actggcattgcaacagctggaaactggtcaattacttcaagtacattgataccaggcgca
cgcactattatcgccaaagcaacggatgcaattggcaatataagtcctgcctcatccgga
cttatcgtaaccattgataccaccgctccaactctggccatcaccagtgatgtacctcaa
ttaaaatcaggagaaacagccaacatcacctttaccttcagtgaagatccgggaacaact
tttgcctgggacggaactaccggtgatgttgtggtaagcggaggaacacttggagccgta
tctggttctggtttaatccgtaccgccacctttacgccaactccggcaagtaccggaacg
gcaagcattactgtagcagcagcaacgtatactgatgtagctggtaatgacggtggcgcg
ggaagcactcctgcactgacctttgatacttccgttccaaatgctccgtctgcgccagta
ttggccacagcaagtgatagtggaatatcgaattctgataacatcaccaatgtgaccact
cctgtgtttacaggtaccgcagaaccaggttctaccgtaaccctttacgatactgacggg
acaactgtaatcggaaccggtattgctaccggtggaaactggtcaattacagcaagtaca
ttgacaccaggcacacataccattactgctaaagcaactgacgcagtgggtaatgaaagt
ccggcttcagcaggactggcagtaactattgatactactgctccgaccctggccatcacc
agtgatgtgcctcaattaaaatcaggagaaacagccaacatcacctttaccttcagtgaa
gatccgggtacaacttttgcctgggacggaacgaccggtgatgtcgtggtaaccggagga
acacttggagccatatctggttctggtctaacccgtaccgcaacctttacaccaacaccg
gcaagctccggaacagtaagcattactgtagctgcagcaacgtatacagatgcggctggt
aatgacggtggcgcaggaacaacccctgcactgaccttcgatactcagagtcctaacgct
ccatctgcacctgttctggctgcagcaagtgatagtggaatatcgaattctgataacatc
accaatgtgaccactcctgtgtttacaggtaccgcagaaccaggttctaccgtaaccctt
tacgatactgacgggacaactgtaatcggaaccggtattgctatcggtggaaactggtca
attacagcaagcacattgacaccaggcacacataccattactgctaaagcaactgacgca
gtgggtaatgaaagcccggcttcagcaggactggcagtaactattgacaccactgctcca
accttggccatcaccagtgatgtacctcaattaaaatcaggagaaacagccaacatcacc
tttaccttcagtgaagatccgggaacaacttttgcctgggacggaactaccggtgatgtc
gtggtaagcggaggaacacttggagccatatccggttctggtttaacccgtaccgcaacc
tttacaccgacaccggcaagctccggaacagtaagcattactgtagctgcagcaacgtat
acagatgcggctggtaatgatggtggcgcgggaacaacccctgccctgactttcgatact
cagagtcctaacgctccatctgctcctgttctggctgcagcaagtgatagtggaatatcg
aattctgataacatcaccaatgtgaccactcctgtgtttacaggtaccgcagaaccaggt
tcaaccgtaacgttatatgatactgacggtacaactgtaattggaaccggtattgctacc
ggtggaaactggtcaattacagcaagtacattgacaccaggcacacataccattacagct
aaagcaactgacgcagtgggtaatgaaagcccggcttcagcaggactggcagtaactatt
gacaccactgctccaaccttggccatcaccagtgatgtacctcaattaaaatcaggagaa
acagccaacatcacctttaccttcagtgaagatccgggaacaacttttgcctgggacgga
actaccggtgatgtcgtggtaaccggaggaacacttggagccatatccggttctggttta
acccgtaccgcaacctttacaccaacgccagcaagctccggaacagtaagcattacagta
gcagcagcaacctacaccgatgcagcgggtaatgacggtggcgcaggaacaacccctgcc
ctgactttcgatactcagagtcctaacgctccatctgctcctgttctggctgcagcaagt
gatagtggaatatcgaattctgataacatcaccaatgtgaccactcctgtgtttacaggt
accgcagaaccaggttcaaccgtaacgttatatgatactgacgggacaactgtaatcgga
actggtgtagctgccggtggaaactggtcaattacagcaagtacattgacaccaggcaca
cataccattactgctaaagcaactgacgcagtgggtaatgaaagtccggcttcagcagga
ctggcagtaactattgatactactgctccgaccctggccatcaccagtgatgtgcctcaa
ttaaaatcaggagaaacagccaacatcacctttacttcagtgaagatccgggaacaactt
ttgcctgggacggaactaccggtgatgtcgtggtaa
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integrated database retrieval system