Pedobacter steynii: BFS30_23555
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Entry
BFS30_23555 CDS
T04469
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
psty
Pedobacter steynii
Pathway
psty03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BFS30_23555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psty03400
]
BFS30_23555
Enzymes [BR:
psty01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BFS30_23555
DNA repair and recombination proteins [BR:
psty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BFS30_23555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AOM80977
UniProt:
A0A1D7QQN2
LinkDB
All DBs
Position
5690717..5692066
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AA seq
449 aa
AA seq
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MSELTGQIQQVIDGFFGHKTFWIIADITNYTYKPQSNYHYFDLVEKDKSAAKILAKVAGR
AWGNASINISNFEKATGQKFKNDINVLIQVSVQYNPSFGLQLNVLDIDTNFTLGLFEQQR
KETLEKLLRENQAFIKRAGDGYLTRNSGLVLNQVIQRIAVISSDTSAGFQDFKHTLQHNP
FGYQFDVDDYFALVQGDGNAKQFLARLIEVYESQKPYDALVIIRGGGAQTDFLIFDNYEL
NRAIAKFPIPIITGIGHQKNETIADLMAHTSTKTPTKAAEFIIAHNRAFEDNLIGIQKMI
LIKSYQMINHHKDRLVRLNQITINTTRNLLHDHHKNIINLSGVMLTNPRIIISNKRKDLS
NLMQNLQSYSKMYFLNKGAHIAHFQSVMRIMSPQNILNKGFAILKVDGKITGNPDQIEPG
AELTVRLANVEIKTIVKSKSVYDENEFNL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
ctgtctgagctgaccggccaaattcaacaggtaattgatggatttttcggtcataaaact
ttttggattattgccgacattaccaattatacttataaacctcaaagcaattaccattac
tttgatttggtggagaaggataagtcggccgcaaaaatactggccaaagtagccggaagg
gcctggggcaatgcctcaattaatatttccaatttcgaaaaagcaacaggtcagaaattt
aaaaatgacatcaatgtactcattcaggtatctgtacagtataatccctcttttggcctg
cagctcaatgtgctggacattgataccaatttcacattgggcctgtttgaacagcaacga
aaagaaacactggaaaaactgcttcgtgaaaaccaggcttttatcaagagagcgggggat
gggtacctgaccagaaacagcggactggtgctgaatcaggtgatccagcggattgccgta
atttcttcggatacttctgccggttttcaggactttaagcacacgctgcagcacaatcct
tttggctaccagtttgatgtcgacgattattttgcgctggttcagggagatggaaatgcc
aaacaattcctggccaggctcatcgaagtctatgaatcacaaaaaccttatgatgcgctt
gtgattatcagagggggaggtgcacagacggattttctgatttttgacaattacgaactc
aaccgggcgatcgccaaatttccgattccgatcatcaccggcatcggccatcagaaaaat
gagaccattgccgatttaatggcacatacctcaaccaaaacacctaccaaagccgcggaa
tttatcattgctcataaccgggcttttgaagacaacctgattggcatacaaaaaatgatt
ctgattaaaagctatcagatgattaatcaccataaagacaggttggtccgtctcaatcag
atcaccattaacaccaccagaaacctgttgcatgaccatcataaaaacatcataaactta
tccggagtgatgctgactaatcccagaatcattatttccaataaacgaaaagacctgagc
aatctgatgcaaaacctgcaatcgtacagtaaaatgtattttctgaacaagggtgctcat
atcgcacattttcaatcggtcatgaggattatgagtccgcagaacattctgaataaagga
tttgccatccttaaagtcgacggaaaaatcaccggaaatccggaccagattgaaccaggt
gcagaattgacggtaaggctggccaatgtagaaataaaaactattgtaaaatctaaatca
gtatacgatgaaaacgaatttaacttatga
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