Pedobacter steynii: BFS30_24245
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Entry
BFS30_24245 CDS
T04469
Name
(GenBank) DNA helicase
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
psty
Pedobacter steynii
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psty03009
]
BFS30_24245
03012 Translation factors [BR:
psty03012
]
BFS30_24245
Enzymes [BR:
psty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BFS30_24245
5.6.2.5 RNA 5'-3' helicase
BFS30_24245
Ribosome biogenesis [BR:
psty03009
]
Eukaryotic type
Other ribosome biogenesis factors
BFS30_24245
Translation factors [BR:
psty03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
BFS30_24245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_30
AAA_19
Viral_helicase1
ResIII
DEAD
Helicase_RecD
PhoH
UvrD-helicase
SLFN-g3_helicase
AAA_22
T2SSE
AAA_16
nSTAND3
PIF1
UvrD_C_2
Herpes_ori_bp
AAA_14
AAA_24
OmpH
ATPase_2
DAP3
AAA_25
HEM4
AAA_7
AAA_5
NPHP3_N
TraI_hel_assoc_N
AAA_18
SRP54
AAA
cobW
ABC_tran
Rad17
NACHT
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AOM79997
UniProt:
A0A1D7QMW6
LinkDB
All DBs
Position
5859765..5861669
Genome browser
AA seq
634 aa
AA seq
DB search
MEYFKKLLELLKTEREEDLRSYLQLTESSSVAERRSNGLSWYPIAIRGSEMSRGDYLTVE
IERTTHQELAHQLRFGASAVLFSNHDPKDRVEGTITHQSGNKLKITLKTDELPDWTRDGK
LGIDVLFDNNSYDEMQAALKHAASSIEKTDQSRLIKILTGEGSPTFSDQIHHYEIAGLNE
VQQQAVNKIVSAQELAIVHGPPGTGKTTTLVQAIKALFKQNHQQILVVAPSNTAVDLLTE
KLDEEGLNVVRVGNPARVSDRLLSLTLDGKMSEHPSMKQIRAFKKQANEFKNMAHKYKRN
FGRAEKEQRKALFDEAHKIMKEVGNTEQYIIDDVLGKAQVVTATLVGANHYTVRNLKFHT
LVIDEAGQALEPACWIPIMKAQKVIFAGDHCQLSPTIKSNEAAKSGLSTTLLEKSIALHP
ESVTLLEEQYRMNKTIMGYSSKVFYENKLKAHGSVADRLLFSEDSPLAFVDTAGCGFEEK
LEGTSSTNPEEAAFLFKHLTQLVATLGGHYTTETFPTIAVISPYKQQILLMKELLLNSAA
LQQYGERISVNTIDSFQGQERDLVYISMTRSNNEGIIGFLSDIRRMNVAMTRARKKLVVI
GDSATLSRLPFYADFIDYAEENNAYQSAWEFAEL
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
ttggaatatttcaaaaagctgcttgagttactgaagactgagcgcgaagaagacctcagg
tcgtacttacaattaacggaatcttcttctgttgcagaacgaagaagcaatggtctttcc
tggtatccgatcgccattagagggtcagaaatgagtcgtggcgattatttaactgtagaa
atagaacgcactactcatcaggagctggcacaccagcttcgctttggggcttcggcggtt
ttgttttccaatcatgatcctaaagatcgcgtagaaggcacaattactcaccaaagcggc
aataagctcaagattaccttaaagacagatgagttgcctgactggaccagagatggtaag
ctgggcattgatgtgctgtttgacaacaacagttatgatgaaatgcaagctgcccttaaa
catgccgcttcgtccattgaaaagaccgaccaaagccgtctgattaaaatcctgactggt
gaaggtagtccgactttttctgatcagatccaccattatgagatcgcgggattaaatgag
gtacagcaacaggcggtaaacaagattgtgtctgctcaggagctggccattgttcatggt
cctccgggaacaggaaaaacaaccactcttgtacaagcgataaaagcgctgttcaagcaa
aatcatcaacagattctggtcgtagccccaagtaataccgcagtagatctgcttactgaa
aaactggacgaagaaggtttaaatgtagttcgcgttggaaatcctgccagggtttcagac
cgcttgctgtccctaaccctggacggaaaaatgtctgagcatcccagcatgaaacagatc
cgggcatttaaaaagcaggcaaatgagttcaaaaacatggcgcataaatacaagcgtaac
tttggccgtgcagaaaaagaacagcgtaaggcactcttcgatgaagcacacaagatcatg
aaagaagtgggcaatacggaacagtatatcattgacgacgtattgggaaaagcgcaggtg
gtaaccgcaactttggttggcgccaaccactacaccgtaagaaacctgaaatttcatacc
ctggtgattgacgaagccggacaagcacttgaacccgcctgttggatcccgattatgaag
gctcagaaagtcatctttgccggagaccattgtcagctctctcctaccattaaatcaaat
gaagctgcaaaatcaggcttaagtactaccctgcttgaaaaatccattgccctgcatccg
gaatcggtaacacttctggaagaacaataccggatgaacaaaaccattatgggctattct
tcaaaggtattttacgagaataaattaaaagcacatggttcagtagcggatcgcctgttg
ttttctgaagatagtcctttagcttttgtcgatacagcaggatgtggatttgaagaaaaa
ttagaaggaacaagttctaccaatcctgaggaagctgcttttctatttaaacaccttacc
caactggttgcaacactcggcggacattataccacagaaacatttccaacaattgcggta
atttcaccttataaacagcaaatcctgctgatgaaggagcttttattgaattcagcagcg
cttcagcaatatggagaaaggatctcggtaaatacgattgatagtttccagggccaggag
cgcgatctggtttatatcagtatgaccaggagtaacaatgaaggcattatcggtttcctt
tcagacatccgcaggatgaacgtggccatgaccagggcgcgcaagaaactggtagtgatt
ggagatagcgctacactttcccgattgcctttttatgcagattttatcgattatgctgag
gaaaacaatgcttatcaaagtgcctgggagtttgcagagttgtaa
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