Pedobacter steynii: BFS30_24275
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Entry
BFS30_24275 CDS
T04469
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psty
Pedobacter steynii
Pathway
psty03420
Nucleotide excision repair
psty03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BFS30_24275
03430 Mismatch repair
BFS30_24275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psty03400
]
BFS30_24275
Enzymes [BR:
psty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BFS30_24275
DNA repair and recombination proteins [BR:
psty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BFS30_24275
MMR (mismatch excision repair)
Other MMR factors
BFS30_24275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
Viral_helicase1
AAA_19
Mob1_phocein
UvrD_C
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
AOM80001
UniProt:
A0A1D7QMW3
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All DBs
Position
5866127..5867269
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AA seq
380 aa
AA seq
DB search
MPLKKNKLLLAAAGSGKTTHLVKEALKIKTSRVLITTYTEANEEEIRKKIYEINGFIPEN
IIIQTWFSFLIQHGVKPYQGVLFEGKINGMLLVSSQSGVKAKSSKGFPITFSEEKEFDQH
YFNKKTKIFSDKISKFVQKSNEASAGKVIKRIERIFSHIFIDEVQDMAGYDLELFIDLFK
SSVITTLIGDPRQVTYLTHNPKKHPGYKNGKIKEFIIDKCSKLCEIDETTLMYSHRNNAE
ICKFASKLYPQYVESAPCVCNECRDFKSEHIGIYLVKPRDIPKYQNDYNPIVLRYQLAEE
PEWNFGNCKGLGFDRVLIHPTAPIIKYLKTGTIIKNDIDNEKEAFIPKFYVALTRARHSV
GIVVDYGNENYIDGIIKWIA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgccattgaaaaaaaataaactgctactcgctgcagcaggttcaggaaaaaccacccac
cttgtgaaagaggcgttgaaaattaaaacgagcagagttttgattacaacatatactgag
gcaaatgaggaggagattagaaaaaagatttacgaaataaatgggtttattccagagaat
ataatcattcagacatggttctcattccttattcagcatggtgtaaagccctatcaaggg
gtgttgtttgaggggaaaattaatggcatgcttttagtaagcagccagtccggtgttaaa
gctaaaagttcaaagggtttccctattactttttccgaagaaaaagaatttgaccaacat
tattttaacaaaaaaacgaaaatcttttcagacaaaatttcaaaattcgtccaaaaaagc
aatgaagcaagtgctggaaaggtgattaagaggattgaaaggattttcagtcatattttt
attgatgaagtgcaagatatggcaggctacgaccttgagctctttattgatttgtttaaa
agcagtgtaataacaactcttattggtgatcctcgacaagttacatatctcacgcacaat
ccaaagaagcatcctggttataaaaatggtaaaatcaaagaatttataattgacaaatgt
tctaagctgtgtgaaatcgatgaaacgactctaatgtattctcatcgaaacaatgcggaa
atttgtaagtttgcgtcaaaactatatcctcaatacgttgaaagcgcgccttgcgtttgc
aatgagtgcagagattttaagtcagaacatatcggtatttatctggtcaaaccacgagat
attcctaaataccaaaatgattacaacccgatcgtgttacgttatcagttggctgaagaa
ccggaatggaacttcggaaattgtaaagggcttggttttgatagagttttaatccacccc
acggctcctataattaagtatctcaaaactggtaccattatcaaaaatgatattgataat
gaaaaagaagcttttattcctaaattttatgttgcgcttaccagggcaagacatagtgtt
gggattgttgttgactatggtaatgaaaactatattgatggtataattaaatggatagct
tag
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