Pedobacter steynii: BFS30_24570
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Entry
BFS30_24570 CDS
T04469
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty
Pedobacter steynii
Pathway
psty02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BFS30_24570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psty03021
]
BFS30_24570
Transcription machinery [BR:
psty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFS30_24570
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
HTH_24
Sigma70_ECF
UPF0122
HTH_11
PF0610-like_N
HTH_40
HTH_23
HTH_10
PH0730-like_N
HTH_28
Sigma70_r3
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AOM80056
UniProt:
A0A1D7QN21
LinkDB
All DBs
Position
complement(5936280..5936858)
Genome browser
AA seq
192 aa
AA seq
DB search
MNQISATDDTVLLDLMRKGDQQAFAILYNRYKGVLFTHAYRKLRDWEEVKDIVQEIFSGL
WAKRETLEITDNLNAYLFKAVRYKIINLIARKNTASIYVDSFQSFLTTYADNTDHLVREK
MLCSIIDAEINNLPPKMRHVFELSRKENLSHKEIAEQLNITEQSVRSHVKNALHILRLKL
GMFLFVALLLNK
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaataagtgccaccgatgataccgtgctcctggacctcatgcgtaaaggggat
cagcaggcttttgctatactgtataacaggtacaaaggggttttatttacccatgcctat
cgaaagcttagggattgggaagaagtaaaagacattgttcaggaaatattctcaggtctg
tgggcaaaacgggagactttggaaatcaccgataatctcaatgcctacttgtttaaggca
gtgcgctataagatcatcaatttgatcgcccgcaaaaacacagcttctatttacgtcgat
agttttcagtccttcctcacgacttatgctgacaataccgatcacctggtccgggaaaaa
atgctatgttcaataatagacgcggaaataaacaacctgccaccgaagatgcgccatgtc
tttgagctaagcaggaaagaaaacttaagtcataaagaaatcgccgagcagctaaatatt
acagaacaaagtgtacgctctcacgtaaagaatgcgctccatatccttcgcttaaaactg
ggcatgttcctttttgtggccctgcttttaaataaataa
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