Pedobacter steynii: BFS30_26295
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Entry
BFS30_26295 CDS
T04469
Name
(GenBank) ligand-gated channel protein
KO
K16092
vitamin B12 transporter
Organism
psty
Pedobacter steynii
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psty02000
]
BFS30_26295
Transporters [BR:
psty02000
]
Other transporters
Pores ion channels [TC:
1
]
BFS30_26295
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Paralog
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
AOM80368
UniProt:
A0A1D7QNX8
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All DBs
Position
complement(6338778..6340838)
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AA seq
686 aa
AA seq
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MRRNNFTIKGINPCFFTFLAISWLGLAMPLNLFAQTDSLKRSRKDSLEKINQLKEVQIKT
IKITRRQTSSTPLQILSGADLEKLNSLSVADAVRFFSGVQLKDYGGIGGLKTINVRSMGT
NHTAVFYDGVQLGNAQNGQVDLGKFSLDNIEEIELYNGQKSNVLQSAKSFASASSLYLKA
RQPSFEEGRNNRFKGVIRTGSFGLVNPSLLWQHKISEHTYSTLSAEFKKANGRYKFRSTN
GVWDTTGVRTDGDVEAMRLELGLNGILRDSSKWSVKLYGYNDNQGLPGAIVANVWHFSQR
MWNRNFFAQSAYEKTIGKYSLMASAKYSNDYLRYLNPDIVTTTGLLNNKYHQQELYLSLA
NKVKINHFWDVVWSTDYQINDMNANLYRFAYPIRNTFLNALATQVHFDRLDIQANLLSTL
TYDKVKSGPAAGNKNELTPTIMISWQPFDQKEFRIRSFYKSIFRMPTFNDLYYAFYQFTI
LKPEYTKQYDLGFTYIKGYENRALTQFSIQTDAYFNKVKDKIVAVPGTSQAMWSMRNLGQ
VEIKGLDVNVQSAWQLNKELSLNAGINYTYQQALNTERTSTTYKHQIPYIPLHNITFLAS
VSYKNLAMNYSYLYTGERYDQSANIAQNYVQPFYTHDMAIHYHAVIHKRKVRVTAEMNNM
FNQAYEVITNYPMPGRSYRFSLTYDY
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaaacaattttaccattaaaggtataaatccttgtttttttacttttcttgcc
atcagctggcttgggttggctatgcctttaaatttgtttgcccaaacggattctttaaag
cgatccagaaaagattcgctggaaaagatcaaccagctgaaagaagtacaaatcaagacc
atcaagattacccggcgtcagacttcttctactcctttacagattctttctggtgctgat
ctggaaaaactgaacagtctttctgttgctgacgcagttcgcttcttttcaggagtacaa
ctgaaagactacggaggtattggtggactgaagaccatcaatgtacgtagtatggggacc
aatcataccgcggttttttatgatggagtacaattaggaaatgcacagaacggacaagta
gacctggggaagttttccctggataatattgaagagatcgaattgtataacgggcagaaa
agcaatgttttgcaatctgccaaaagttttgcttctgcaagttccttatatctgaaagcg
agacagccgagttttgaagaggggagaaataaccggtttaagggtgtaatcagaacaggt
tcttttggtctggttaatccttcattactatggcagcataaaatttcggaacatacttat
agtacgttgagcgctgagtttaaaaaggctaatggacgttataaatttcgttcgacaaat
ggggtatgggataccacaggagtaagaacagatggggatgtggaggcaatgaggctggaa
ctgggactgaacggaatccttcgggatagcagcaaatggagtgttaagttgtatggttac
aatgataatcagggtttgcccggagctattgttgccaatgtatggcatttttcccaacgg
atgtggaatcgtaatttctttgctcaatcagcctatgaaaagactataggaaagtatagt
ctgatggcttccgctaaatattccaatgattatctgcgctatctgaacccggatattgtg
acgacaacagggcttttgaacaacaaatatcatcagcaggaattgtatctgtcattggca
aataaagtaaaaatcaatcatttttgggatgtggtatggtcgacagactatcagattaat
gatatgaatgcaaatctctatcgctttgcttaccccatcaggaatacctttttaaatgca
ttggctacgcaagtccacttcgacagactggatatccaggcgaatttgctaagtactttg
acctacgataaggtgaaaagtgggcctgctgcggggaataagaatgaacttacgccaacc
attatgatatcctggcagccatttgatcagaaagagtttaggattcgttctttttacaag
agcatattccggatgccgacatttaatgatttgtattatgccttttatcagtttactata
cttaaacctgaatataccaaacaatacgatctgggctttacttatataaaaggatatgaa
aacagggcattaacgcaattttctatacaaacagatgcttattttaataaggtgaaagat
aaaatcgttgcggttcccggaacatcacaagccatgtggagtatgagaaacctggggcag
gtggagattaaaggtttggatgtcaatgtacaatcggcatggcagctgaataaggaatta
agcctaaatgcaggtatcaactatacttatcagcaggccctgaatacggaaaggacttct
acaacatataaacatcagattccatatatcccattacataacattacttttctggcaagt
gtatcctataaaaatctggccatgaactacagctatttgtatacaggagaacgttatgac
cagtcggccaacattgctcagaattatgttcagcctttttatacccatgatatggccatt
cactatcatgcggttattcataaaagaaaagtaagggttactgcagaaatgaataatatg
tttaatcaggcctacgaggtcattaccaattaccctatgcctggccgttcctaccggttt
agcctgacttatgattattag
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