Pedobacter steynii: BFS30_26465
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Entry
BFS30_26465 CDS
T04469
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psty
Pedobacter steynii
Pathway
psty03030
DNA replication
psty03430
Mismatch repair
psty03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BFS30_26465
03430 Mismatch repair
BFS30_26465
03440 Homologous recombination
BFS30_26465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psty03032
]
BFS30_26465
03400 DNA repair and recombination proteins [BR:
psty03400
]
BFS30_26465
Enzymes [BR:
psty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BFS30_26465
DNA replication proteins [BR:
psty03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BFS30_26465
DNA repair and recombination proteins [BR:
psty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BFS30_26465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AOM80397
UniProt:
A0A1D7QP19
LinkDB
All DBs
Position
complement(6380655..6381623)
Genome browser
AA seq
322 aa
AA seq
DB search
MKLNLNRPLAFFDLETTGVNVGADRIVEIAILKAMPDGSELIKTMRINPEMPIPLASSLI
HGIYDKDIANEPTFKDVAAELSAFIGDADLAGYNSNRFDIPVLLEEFLRAGVDFDMSDRK
FVDVQNIFHQMEQRTLRAAYKFYCDKDIVNAHSAEADILATYHVLLAQIERYSDTEFEDK
QGKISKPVKNDVDALHTFTNMNKPVDFAGRMVFNEQDQEIFNFGKHKGKTVEQVFDTEPS
YYAWMKQGDFPLYTKKKLEEIWTRWNKKKEQLKQEKQQQAGANKPKPAQPNANPSAPQAK
KPKPAVAVTNDMLEQLKMKFGK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaatttaaaccgccctcttgctttttttgatctggaaaccactggtgttaat
gttggtgcagatcgtattgtagaaattgccattttaaaagcgatgcccgatggatcggag
ttgatcaaaacaatgcgcattaaccctgaaatgccgattcctttagcatcttccctgatt
catgggatttatgataaggatattgccaatgagcctacttttaaagatgtagctgctgaa
ctgtctgcatttattggagatgctgaccttgcaggttataattccaacagatttgacatt
ccggtattactggaagaatttttaagagcaggagtagattttgatatgtctgacaggaaa
tttgtagacgttcagaatatatttcaccagatggaacaacgcactttacgtgctgcctat
aagttttattgcgacaaagatattgtgaatgcacactctgctgaagccgatatcctggcg
acttaccatgtgcttcttgctcagattgagcgttacagcgatactgagtttgaagataaa
caaggtaaaatttctaagccggtaaagaatgatgtagatgcgctgcatacctttacgaat
atgaataaacccgttgattttgccggaagaatggttttcaatgagcaggatcaggaaata
tttaacttcggtaaacataaaggtaaaacggttgaacaggtatttgatactgagcctagc
tattatgcatggatgaagcaaggggatttcccgctttataccaagaaaaagctggaagag
atctggaccagatggaacaagaagaaggaacagttgaaacaggaaaagcagcaacaggcc
ggggcaaataagccaaaaccagctcagcctaatgccaatccatcagctccacaagctaaa
aagccgaaacctgcagttgcagtaactaacgatatgttagagcaattgaaaatgaagttt
ggaaaataa
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