Pedobacter steynii: BFS30_26635
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Entry
BFS30_26635 CDS
T04469
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psty
Pedobacter steynii
Pathway
psty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BFS30_26635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psty03019
]
BFS30_26635
03016 Transfer RNA biogenesis [BR:
psty03016
]
BFS30_26635
Enzymes [BR:
psty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BFS30_26635
Messenger RNA biogenesis [BR:
psty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BFS30_26635
Transfer RNA biogenesis [BR:
psty03016
]
Prokaryotic type
tRNA degradation factors
BFS30_26635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AOM80426
UniProt:
A0A1D7QP31
LinkDB
All DBs
Position
complement(6420352..6422499)
Genome browser
AA seq
715 aa
AA seq
DB search
MNVIKKSFDLGDGRTIEIETGKLAKQADGSVVVKMGDTMLLATVVSTVGAKAGVDFLPLS
VDYQEKYAAAGRIPGGFLRREARLSDYEVLISRLVDRALRPMFPEDYHSDTQVMITLISS
DKNIMPDCLAGLAASAAIAVSDIPFNGPISEVRVAKIDGNFVINPYVSDLERATMEFLVA
GTENDIVMVEGEADEISEADMVEAIEFAHKAIVVQVQAQKELAELVGKTVKRTYSHEDSN
PELKEQVYAATYDKVYAIAKSNTSKGERGDAFGAILMDFIATLGEDIDDVTGFLSKKYFH
DVQYDAIRNLVLDEGIRLDGRDVRTVRPIWSEVGYLPSAHGSAVFTRGETQSLTTVTLGS
KDDEQMIDGAFVNGYNKFLLHYNFPGFSTGEVRPNRGAGRREIGHGNLAMRSLKKVLPGL
EENPYTIRIVSDILESNGSSSMATVCAGTLALMDAGIKIKAPVSGIAMGLITDEKTGKYA
ILSDILGDEDHLGDMDFKVTGTEKGIVACQMDLKINGLKWEVLTNALNQAKEARLHILNE
MKKTIAAPREDYKDHAPRIVSLSIDKEFIGAVIGPGGKIIQEMQRETGASISIEEVGNKG
IVEIFADNKAAIDAAVGRINAIAAKPDIGATYDGKVKSIMPFGAFVEIMPGKDGLLHISE
IDWTRLETMDGVFKEGDRIQVKLLDIDKQGKMKLSRKALLPRPPKPEGAAENKPA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaataaaaaaatcgttcgacttgggcgatggaagaacaatcgaaattgaaaca
gggaaattggcgaaacaagctgatggttctgtagttgttaaaatgggcgataccatgtta
ttggctactgtagtatctacagtgggtgcaaaagctggtgttgactttttgccactatct
gtagattatcaggagaaatatgctgccgcaggccgtattccaggtggattcttacgtcgt
gaggcaagattatcagattatgaagttttaatttcacgtctggttgaccgtgctttacgc
ccgatgttccctgaagattatcactcagatactcaggtgatgatcactttgatctcttct
gacaaaaatataatgcctgactgtttagctggtttagctgcttcggctgctatcgcggtt
tcagatatccctttcaacggaccaatctctgaagtacgtgtagctaaaatcgatggtaac
tttgtaattaacccatatgtgagcgacttagagcgtgcaactatggagttccttgttgca
ggtactgaaaacgacatcgtaatggtggaaggtgaagcggatgagatctctgaagctgac
atggtagaagcaatcgaatttgcacacaaagcaatcgttgtacaggttcaggcacaaaaa
gaattggctgaattagtaggtaagacggttaaacgtacttattctcatgaagacagcaat
cctgagttaaaagaacaggtttatgcagctacttatgataaagtatatgcaatagcgaaa
agcaatacaagcaaaggtgagcgtggtgatgcattcggtgcaatcctgatggatttcatc
gctactttaggtgaagatatcgatgatgtaaccggattcttatctaaaaaatatttccat
gatgtacaatatgatgccatccgtaacctggtattagacgaaggaattcgtttagacggt
cgtgatgtacgcacggtacgtccgatctggagtgaagtaggttacctgccttctgctcac
ggatcagcagtatttacacgtggtgaaacccaatcattaactaccgttactttaggttct
aaagatgatgagcaaatgattgatggtgctttcgttaatggatataacaaattcttatta
cactataacttccctggtttctcaactggtgaggttcgtcctaacagaggtgctggtcgt
cgtgaaatcggtcatggtaacttagccatgcgttcattgaagaaagtattacctggattg
gaagaaaacccatataccatccgtatcgtttctgatatcctggaatcaaacggttcttca
tcaatggcaactgtttgtgcaggtactttagcactgatggatgcaggtattaaaatcaaa
gcaccggtatccggaattgcaatgggattaatcactgatgagaaaactggtaaatatgca
atcctttcagatatcttaggtgatgaagatcatttaggtgatatggactttaaagttacc
ggtactgaaaaaggtatcgtagcttgtcagatggatttaaaaatcaatggcttgaaatgg
gaagtgttaactaacgccctaaaccaggctaaagaagctcgtttacacatcttaaacgaa
atgaagaaaacgattgctgcaccacgtgaagactacaaagatcacgcgccacgtatcgtt
tctctaagtattgataaagaatttattggtgctgtaatcggcccaggcggtaaaatcatc
caggaaatgcaacgcgaaaccggtgcatctatctctatcgaagaagtaggtaacaaaggt
atcgttgaaatcttcgctgataacaaagctgctattgatgctgctgttggccgtatcaat
gcgattgctgctaaaccagacataggtgctacttatgatggtaaagtgaaatctattatg
ccatttggtgcattcgtagaaatcatgccaggaaaagacggattgttgcacatctctgag
atcgactggactcgtttagaaacgatggacggtgtgttcaaagaaggtgacaggattcag
gtgaaacttttggatattgacaaacaaggaaaaatgaaactttcaagaaaagctttatta
cctcgtccaccaaaaccggaaggcgccgcagaaaacaaacctgcataa
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