KEGG   Pedobacter steynii: BFS30_27265
Entry
BFS30_27265       CDS       T04469                                 
Name
(GenBank) hypothetical protein
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty  Pedobacter steynii
Pathway
psty02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psty00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BFS30_27265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psty03021]
    BFS30_27265
Transcription machinery [BR:psty03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BFS30_27265
SSDB
Motif
Pfam: Sigma70_r4_2 GerE Sigma70_r4 HTH_24 Sigma70_ECF Sigma70_r2 HTH_40 HTH_AsnC-type HTH_20 HTH_10 Get5_C HTH_11 HTH_5 MarR_2 TNP-like_GBD Trans_reg_C DUF1804 HTH_38 HTH_23 HTH_DeoR MtrG HTH_26 HTH_28 PCI KMP11
Other DBs
NCBI-ProteinID: AOM80531
UniProt: A0A1D7QPL8
LinkDB
Position
complement(6563400..6563966)
AA seq 188 aa
MLQGSGNNEELVRQLKLGNEVAYDLLYEQYWKRLYIHVLSRVKDEDAAKDIVQNVFISIW
ERKDALEIHTSLDQFLFGAVKLKVLNYFRAEKMEERVMEYTLQKLERASVSIHELSDYYD
LEKLIETEIRELPEKMRHAYLMRNAHLSTSEIAEKLNLAEQTVSNHVSEAMRRLRKKLGD
KFPERMIS
NT seq 567 nt   +upstreamnt  +downstreamnt
atgcttcaaggtagtggaaataatgaggaacttgtccggcagttaaaattgggcaatgag
gttgcttatgaccttttgtacgaacaatactggaaaagactctatatccatgtccttagc
cgggtaaaagatgaagacgctgccaaggatattgtgcagaatgtttttatcagcatctgg
gagcgaaaagatgctttagagatccatacttctctggatcagtttttattcggagcggta
aaattgaaagtgttgaattatttcagagccgaaaaaatggaagaacgggtgatggaatat
accctgcaaaaactggagcgggctagcgtttctattcatgagctgtctgattattatgac
cttgaaaaactgatagaaactgaaataagggaacttcctgaaaagatgcggcatgcctat
cttatgagaaatgcccatttatctacctcagaaattgctgaaaaattaaaccttgccgag
caaaccgtttccaatcacgtttctgaagctatgcgaaggttgcggaaaaagttaggagat
aaatttccggagcgtatgattagttaa

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