Pedobacter steynii: BFS30_27265
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Entry
BFS30_27265 CDS
T04469
Name
(GenBank) hypothetical protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psty
Pedobacter steynii
Pathway
psty02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BFS30_27265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psty03021
]
BFS30_27265
Transcription machinery [BR:
psty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFS30_27265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
GerE
Sigma70_r4
HTH_24
Sigma70_ECF
Sigma70_r2
HTH_40
HTH_AsnC-type
HTH_20
HTH_10
Get5_C
HTH_11
HTH_5
MarR_2
TNP-like_GBD
Trans_reg_C
DUF1804
HTH_38
HTH_23
HTH_DeoR
MtrG
HTH_26
HTH_28
PCI
KMP11
Motif
Other DBs
NCBI-ProteinID:
AOM80531
UniProt:
A0A1D7QPL8
LinkDB
All DBs
Position
complement(6563400..6563966)
Genome browser
AA seq
188 aa
AA seq
DB search
MLQGSGNNEELVRQLKLGNEVAYDLLYEQYWKRLYIHVLSRVKDEDAAKDIVQNVFISIW
ERKDALEIHTSLDQFLFGAVKLKVLNYFRAEKMEERVMEYTLQKLERASVSIHELSDYYD
LEKLIETEIRELPEKMRHAYLMRNAHLSTSEIAEKLNLAEQTVSNHVSEAMRRLRKKLGD
KFPERMIS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaggtagtggaaataatgaggaacttgtccggcagttaaaattgggcaatgag
gttgcttatgaccttttgtacgaacaatactggaaaagactctatatccatgtccttagc
cgggtaaaagatgaagacgctgccaaggatattgtgcagaatgtttttatcagcatctgg
gagcgaaaagatgctttagagatccatacttctctggatcagtttttattcggagcggta
aaattgaaagtgttgaattatttcagagccgaaaaaatggaagaacgggtgatggaatat
accctgcaaaaactggagcgggctagcgtttctattcatgagctgtctgattattatgac
cttgaaaaactgatagaaactgaaataagggaacttcctgaaaagatgcggcatgcctat
cttatgagaaatgcccatttatctacctcagaaattgctgaaaaattaaaccttgccgag
caaaccgtttccaatcacgtttctgaagctatgcgaaggttgcggaaaaagttaggagat
aaatttccggagcgtatgattagttaa
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