Pseudoxanthomonas suwonensis 11-1: Psesu_0225
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Entry
Psesu_0225 CDS
T01403
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psu
Pseudoxanthomonas suwonensis 11-1
Brite
KEGG Orthology (KO) [BR:
psu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psu03032
]
Psesu_0225
03400 DNA repair and recombination proteins [BR:
psu03400
]
Psesu_0225
Enzymes [BR:
psu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Psesu_0225
DNA replication proteins [BR:
psu03032
]
Prokaryotic type
DNA Topoisomerases
Psesu_0225
DNA repair and recombination proteins [BR:
psu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Psesu_0225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ADV26087
UniProt:
E6WPB4
LinkDB
All DBs
Position
complement(248755..251253)
Genome browser
AA seq
832 aa
AA seq
DB search
MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPERGFAMRYDLIEKN
EKHVEAIAKAARSADDIWLATDPDREGEAISWHIAEILKERGLLDGKPLRRVVFTEITPR
AIKEAMTQPRTIAGELVDAQQARRALDYLVGFNLSPVLWRKVQPGLSAGRVQSPALRMIV
EREEEIEAFKAREYWSIGAELAHAAQPFSAKLVKLDGQKFEQFTITDGESAEAARLRIQQ
AAAGALHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVTLGEE
GTVGLISYMRTDSVNLSQEAVAEIRDVIARDYGTASVPDKPNTYQTKSKNAQEAHEAIRP
TSALRTPGSVARFLTDDERRLYELVWKRAVASQMVPATLNTVSVDLAAGSDHVFRASGTT
VVFPGFLAVYEEGKDTKTAEDEDEGRKLPPLKPGERVPLDRIHADQHFTQPPPRFTEAAL
VKALEEYGIGRPSTYASIIQTLLFRKYAEMEGRAFRPTDVGRAVSKFLSGHFTRYVDYDF
TARLEDELDAVSRGEEEWVPLMERFWAPFKELVEDKKESLDRTDAGSSRSLGIDPKSGKE
VSARIGRFGPMVQIGTVDDEEKPKFASLQPGQSIYSISLEDALKLFDMPRNLGESNGQQV
SVGIGRFGPFAKRGSTYASLKKEDDPYKIDLARAVELIEEKEEIARNRIIKEFPGSDIQV
LNGRFGPYISDGKLNGKIPKDREPSTLTLEEVQQLLAETGKPARRGFGAKKAVARKAATK
TAASKEAAPKKALAKKAPAKKAAKKATRKAAAKKAPAKKAAARATADDAPPF
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcacctcctcatcgtcgagtcgcccgccaaggccaagacgatcaacaagtac
ctcggcaaggacttcaccgtcctggcctcctacgggcacgtccgcgacctggtgccgaag
gaaggcgcggtcgatccggagcgcggcttcgccatgcgctacgacctgatcgagaagaac
gagaagcacgtcgaggcgatcgccaaggccgcccggtccgccgacgacatctggctggcc
accgacccggaccgcgagggcgaggcgatcagctggcacatcgccgagatcctgaaggag
cgtggcctgctcgacggcaagccgctgcgccgggtggtgttcaccgagatcaccccgcgg
gcgatcaaggaagccatgacccagccgcgcaccatcgccggcgagctggtggacgcccag
caggcgcgccgcgcgctggactacctggtcggcttcaacctctccccggtgctgtggcgc
aaggtccagccgggcctgtcggccggccgcgtgcagtcgccggcgctgcgcatgatcgtc
gagcgcgaggaggagatcgaggcgttcaaggcgcgcgagtactggagcatcggcgccgaa
ctggcgcatgcggcgcagccgttctcggccaagctggtcaagctggacgggcagaagttc
gagcagttcaccatcaccgacggcgagtcggccgaggccgcgcgcctgcgcatccagcag
gccgcagccggcgcgctgcatgtcaccgacgtcgccagcaaggagcgcaagcgccgcccg
gcgccgccgttcaccacctcgaccctgcagcaggaggcctcgcgcaaactcggcttcacc
acccgcaagaccatgcaggtggcgcagaagctgtacgagggcgtgaccctgggcgaggag
ggcacggtcggcctgatcagctacatgcgtaccgactcggtgaacctgtcgcaggaggcc
gttgccgagatccgcgacgtgatcgcccgcgactacggcaccgcctcggtgccggacaag
ccgaacacctaccagaccaagtccaagaacgcccaggaagcgcacgaggcgatccgtccg
acctcggcgctgcgtacgccgggttcggtcgcccgcttcctcaccgacgatgagcgccgg
ctctacgaactggtgtggaagcgcgccgtggccagccagatggtcccggccacgctcaac
accgtctcggtcgacctggccgccggcagcgaccatgtgttccgcgccagcggcaccacc
gtggtgttccccggcttcctggccgtgtacgaggaaggcaaggacacgaagaccgccgag
gacgaggacgagggccgcaagctgccgccgctcaagccgggcgagcgcgtgccgctggac
cgcatccacgccgaccagcacttcacccagccgccgccgcgcttcaccgaagcggccctg
gtcaaggcactcgaggaatacggcatcggccgtccctccacctacgcctcgatcatccag
accctgctgttccgcaagtacgcggagatggaaggccgtgccttccgtcccaccgacgtc
ggccgcgcggtcagcaagttcctgtccggccacttcacccgctacgtggactacgacttc
accgccaggctcgaggacgagctggacgcggtgtcgcgcggcgaggaggagtgggtgccg
ctgatggagcggttctgggcgccgttcaaggagctggtcgaggacaagaaggagtcgttg
gaccgcaccgacgccggcagctcgcgctcgctgggcatcgacccgaagagcggcaaggaa
gtcagcgcgcggatcggccgtttcggcccgatggtgcagatcggcacggtcgacgacgag
gagaagccgaagttcgcctccctgcagccgggccagagcatctactccatctccctggag
gacgcgctgaagctgttcgacatgccgcgcaacctgggcgagagcaacggccagcaggtc
agcgtcggcatcggccgcttcggtcccttcgccaagcgcggcagcacctacgcctcgctg
aagaaggaggacgatccgtacaagatcgacctggcgcgcgccgtggagctgatcgaggag
aaggaggagatcgcgcgcaaccggatcatcaaggaattcccgggcagcgacatccaggtg
ctcaacgggcgcttcggcccgtacatcagcgacggcaagctcaacggcaagatccccaag
gaccgcgagccgtcgacgctgaccctggaggaagtgcagcagctgctggccgagaccggc
aagccggcgcgtcgtggcttcggcgcgaagaaggcggtggccaggaaggccgcgaccaag
accgccgccagcaaggaagccgcgccgaagaaggccctggccaagaaggcacctgcgaag
aaggccgcgaagaaggcgaccaggaaggccgccgccaagaaggctcccgcgaagaaggcc
gcggcacgcgcaacggccgacgacgctccgccgttctga
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