Pseudoxanthomonas suwonensis 11-1: Psesu_0686
Help
Entry
Psesu_0686 CDS
T01403
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psu
Pseudoxanthomonas suwonensis 11-1
Pathway
psu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Psesu_0686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psu03019
]
Psesu_0686
03400 DNA repair and recombination proteins [BR:
psu03400
]
Psesu_0686
Enzymes [BR:
psu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Psesu_0686
Messenger RNA biogenesis [BR:
psu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Psesu_0686
DNA repair and recombination proteins [BR:
psu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Psesu_0686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
LexA_DNA_bind
ResIII
IF2_N
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
ADV26539
UniProt:
E6WQU0
LinkDB
All DBs
Position
complement(765804..767675)
Genome browser
AA seq
623 aa
AA seq
DB search
MQESLNATPSRAGSAPVARDALSVLRQVFGYDAFRGQQQDIIEHVAAGNDALVLMPTGGG
KSLCYQVPALLREGTGIVVSPLIALMQDQVEALLQLGVRAACLNSTLDAEQARQVERELL
DGTLDLLYVAPERLLTGRFLSLLERSRIALFAIDEAHCVSQWGHDFRPEYRELTVLHERW
PDVPRLALTATADPPTRREIAERLALESARCFLSSFDRPNIRYAVAHKDNPRRQLLDFLG
GHRGESGIVYCLSRRKVEETAEFLAGQGIAALPYHAGLPSDVRAQNQRRFLREDGIVMCA
TIAFGMGIDKPDVRFVAHLDLPKSIEGYYQETGRAGRDGEPAEAWMGYGLGDVVLLRQMI
EQGEASGERKALERRKLDQLLGYCESAMCRRQALLAAFGEAYESPDGREGCGNCDNCLQP
VRTWDATEAARKALSCVYRTGQRFGASHLIEVLRGADTEKVRQFRHHELSTYGIGTDLDT
NTWRSVFRQLVVAGLLEVDAEGHGGLRLGAAARPVLKGERQVLMREEPARRPGRSSGGDR
PSQSTLHVDSHDRPLFDALRAWRAGLAREQNVPAYVIFHDRTLRDIAQLRPATISELARV
GGVGGGKLARYGQDVLDVIREYG
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaatccttgaacgccacgccgtcgcgcgccggcagtgcgcccgtggcgcgcgat
gcgttgtccgtgctgcgccaggtgttcggctacgacgccttccgcggccagcagcaggac
atcatcgagcacgtcgccgcgggcaacgacgccctggtgctgatgcccaccggcggcggc
aagtcgctgtgctaccaggtgccggcgctgctgcgcgagggcaccggcatcgtggtctcg
ccgctgatcgcgctgatgcaggaccaggtcgaggcgctgctgcagcttggcgtgcgcgcg
gcctgcctcaactccaccctggacgccgaacaggcccgccaggtcgagcgcgagctgctc
gacggcacgctcgacctgctctacgtcgcccccgagcggctgctgaccggccgcttcctg
tcgctgctggaacgcagccgcatcgccctgttcgcgatcgacgaggcgcactgcgtctcg
cagtggggccacgatttccgccccgagtaccgcgaactgacggtgctgcacgagcgctgg
ccggacgtgccccgcctggcactgaccgccaccgccgatccgccgacccggcgcgagatc
gccgagcggctggcgctggaaagcgcacgctgcttcctcagctcgttcgaccgccccaac
atccgctacgcggtggcgcacaaggacaacccgcgccggcagctgctggacttcctgggc
gggcatcgcggcgagtcgggcatcgtctactgcctgtcccgacgcaaggtcgaggagacc
gcggagttcctcgccggacagggcatcgccgccctgccctaccacgccggcctgccctcg
gacgtgcgcgcgcaaaaccagcgccgcttcctgcgcgaggacggcatcgtgatgtgcgcg
accatcgccttcggcatgggcatcgacaagccggacgtgcgcttcgtcgcccacctcgac
ctgcccaagtcgatcgagggctattaccaggagaccggccgcgccggccgcgacggcgaa
ccggccgaggcctggatgggctacggcctgggcgacgtcgtcctgctgcggcagatgatc
gagcagggcgaggccagcggggagcgcaaggccctggagcggcgcaagctggaccagctg
ctgggctactgcgaatcggccatgtgccggcgccaggccctgctggccgcgttcggcgaa
gcctacgaatctcccgatggacgcgaaggctgcggcaactgcgacaactgcctgcagccg
gtgcgcacctgggacgccaccgaggcggcacgcaaggcgctcagctgcgtgtaccgcacc
ggccagcgcttcggcgcctcgcacctgatcgaggtgctgcgcggcgccgataccgagaag
gtgcgccagttccgccaccacgagctgtccacctacggcatcggcaccgacctggacacc
aacacctggcgcagcgtgttccgccagctggtggtcgccggcctgctggaagtcgatgcc
gaaggccatggcggcctgcgcctcggcgcggccgcgcggccggtgctcaagggcgagcgc
caggtgctgatgcgcgaggaacctgcgcgccgtccgggccgctccagcggcggcgaccgt
cccagccagagcaccctgcacgtcgattcgcatgaccgtccgctgttcgacgcgctgcgc
gcctggcgcgctggcctggcgcgcgagcagaacgtgccggcctacgtgatcttccacgac
cgcaccctgcgcgacatcgcccagctgcgcccggccacgatcagcgagctggcgcgggtc
ggcggcgtcggtgggggcaagctggcgcgctatggccaggacgtgctggacgtgatccgc
gagtacggctga
DBGET
integrated database retrieval system
