Pseudoxanthomonas suwonensis 11-1: Psesu_2311
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Entry
Psesu_2311 CDS
T01403
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psu
Pseudoxanthomonas suwonensis 11-1
Pathway
psu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Psesu_2311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psu03021
]
Psesu_2311
03400 DNA repair and recombination proteins [BR:
psu03400
]
Psesu_2311
Enzymes [BR:
psu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Psesu_2311
Transcription machinery [BR:
psu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Psesu_2311
DNA repair and recombination proteins [BR:
psu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Psesu_2311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ADV28145
UniProt:
E6WVE6
LinkDB
All DBs
Position
complement(2546190..2547188)
Genome browser
AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLNGNRAKIVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLQEDVLEVLLNLKDVAIRMHTGESATLSLAKQGPGVVTAGDIKTDHS
VEILNPEHVICHLTKDTALNMRLKIERGFGYQPATSRRRPDEETRAIGRLMLDASFSPVR
RVAYSVEAARVEQRTDLDKLVIDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
AKPAQAGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLSLGMKLENWPPAGVAAHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaaccaggtcctgcgtccccgcggaccgcagatcgaacgcctcaat
ggcaatcgcgccaagatcgtgatcgagccgctcgagcgcggctacgggcacacgctgggc
aacgccctgcgtcgcgtcctgctgtcctcgatcccgggcttcgcgatcaccgaggtcgag
atcgacggcgtgctgcacgagtacaccacggtcgagggcctgcaggaagacgtgctggaa
gtcctgctgaacctgaaggacgtcgccatccgcatgcacaccggcgagagcgcgaccctg
agcctggccaagcagggcccgggcgtcgtcaccgccggcgacatcaagaccgaccacagc
gtcgagatcctgaatcccgagcacgtgatctgccacctgaccaaggacacggcgctgaac
atgcgcctgaagatcgagcgcggcttcggctaccagccggccacctcgcgtcgccgtcct
gacgaagagacccgcgccatcggccgcctgatgctggacgcctcgttctcgccggtgcgc
cgcgtcgcctactcggtcgaagccgcgcgcgtcgagcagcgcaccgacctggacaagctg
gtcatcgacatcgagaccaacggcaccatcgacgccgaggaagccgtgcgcaccgccgcc
gacatcctgagcgaccagctgtcggtgttcggcgacttcacccaccgcgaccgcggtgcg
gccaagccggcgcaggccggcgtcgacccggtgctgctgcgcccgatcgacgacctggag
ctgaccgtgcgttcggccaactgcctgaaggccgagagcatctactacatcggcgacctg
atccagaagaccgaggtcgagctgctcaagaccccgaacctgggcaagaagtcgctgacc
gagatcaaggaagtgcttgcccagcgcggcctctccctcggcatgaagctcgagaactgg
ccgccggccggtgttgccgcccacggcatgcttggctga
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