Pseudoxanthomonas suwonensis 11-1: Psesu_2470
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Entry
Psesu_2470 CDS
T01403
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
psu
Pseudoxanthomonas suwonensis 11-1
Pathway
psu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Psesu_2470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psu03019
]
Psesu_2470
Enzymes [BR:
psu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Psesu_2470
Messenger RNA biogenesis [BR:
psu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Psesu_2470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADV28302
UniProt:
E6WW94
LinkDB
All DBs
Position
2711430..2712821
Genome browser
AA seq
463 aa
AA seq
DB search
MSFESLGLAPFLLRALAEQGYETPTPIQQQAIPLALAGHDLLAGAQTGTGKTAAFGLPLL
QYLGTEPQKVGPGPRKPRALVLTPTRELATQVHDSLRGYSKYLRIPSAVIYGGVGMGNQL
DSLRRGVDMVIACPGRLIDHIERRSIDLSGIEVLILDEADRMLDMGFLPSIKRILAKLPK
QNRQTLLFSATFPESIKQLAMEFMRNPREVQVTPQNTVAETIAHRVHPVDTARKRELLLH
LLGQDARVQTLVFAKTKHGSDKLATHLEKAGIQAAAIHGNKSQGQRLRALGDFKSGKVKV
LVATDIAARGIDIDQLPRVINYDLPMVAEDYVHRIGRTGRNGANGEALSLVSQEDAKYLR
QIVRMLGRDMEIRDLPGFEPQVPIRWGNSAPGKAEQPGGQRPPRKPGGGRGRRPSGGGEG
QAHAHAGNRGGNGRSGARAPAAAHAHQRNQQRNGGGPRRDANR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgaatcgctgggcctggcgcccttcctgctgcgcgcgctcgccgagcagggc
tacgaaacccccaccccgatccagcagcaggccatcccgcttgccctggccggccatgac
ctgctcgccggcgcccagaccggcaccggcaagaccgccgccttcggcctgccgctgctg
cagtacctgggcaccgagccgcagaaggtcggccccggcccgcgcaagccgcgcgccctg
gtcctgacccccacccgcgagctggccacccaggtgcatgacagcctgcgcggctacagc
aagtacctgcgcatccccagcgccgtgatctacggcggcgtcggcatgggcaaccagctg
gacagcctgcgccgtggcgtggacatggtgatcgcctgcccgggccgcctgatcgaccac
atcgagcgccgcagcatcgacctgtcgggcatcgaggtgctgatcctggacgaggccgac
cgcatgctcgacatgggcttcctgccctcgatcaagcgcatcctggccaagctgcccaag
cagaaccgccagaccctgctgttctcggccaccttcccggagtcgatcaagcagctggcg
atggagttcatgcgcaacccgcgcgaggtccaggtgaccccgcagaacaccgtggccgag
accatcgcccaccgcgtgcacccggtcgacaccgcgcgcaagcgcgagctgctgctgcac
ctgctgggccaggacgcgcgcgtgcagaccctggtgttcgccaagaccaagcacggcagc
gacaagctggccacccacctggagaaggccggcatccaggccgccgcgatccatggcaac
aagagccagggccagcgcctgcgcgcgctgggcgacttcaagtcgggcaaggtcaaggtg
ctggtggcgaccgacatcgccgcgcgcggcatcgacatcgaccagctgccgcgggtgatc
aactacgacctgccgatggtcgccgaggactacgtgcaccgcatcggccgcaccggccgc
aacggcgccaacggcgaggccctgtcgctggtctcgcaggaagacgcgaagtacctgcgc
cagatcgtacgcatgctcggccgcgacatggaaatccgcgacctgccaggcttcgagccg
caggtcccgatccgctggggcaacagcgccccgggcaaggccgagcagccgggcgggcag
cgtccgccgcgcaagccgggtggcggccgtggccgtcgtccgtcgggcggtggcgaaggc
caggcccacgcccacgccggcaaccgcggcggcaacggccgtagcggcgcccgcgctccg
gcggcggcgcatgcgcaccagcgcaaccagcagcgcaacggcggcggcccgcgccgcgac
gccaaccgctga
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integrated database retrieval system
