Paenalkalicoccus suaedae: FLK61_23105
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Entry
FLK61_23105 CDS
T08127
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
psua
Paenalkalicoccus suaedae
Pathway
psua03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psua00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FLK61_23105 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psua03021
]
FLK61_23105 (rpoC)
03400 DNA repair and recombination proteins [BR:
psua03400
]
FLK61_23105 (rpoC)
Enzymes [BR:
psua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FLK61_23105 (rpoC)
Transcription machinery [BR:
psua03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FLK61_23105 (rpoC)
DNA repair and recombination proteins [BR:
psua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FLK61_23105 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QKS69692
UniProt:
A0A859FAA8
LinkDB
All DBs
Position
129618..133232
Genome browser
AA seq
1204 aa
AA seq
DB search
MIDVNNFEYMKIGLASSDKIRSWSRGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRSLEEVIYFASYVVTDAGDTPLELKQLLSEKEYRAYRDKYGRSFTAEMGAEAIRKLLS
DIDLEKEAIQLKEELETAQGQRRTRAIKRLEVIEAFRHSENEPSWMVLDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVSQGLAHNIKSAKRKVERVHPEVWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSAEAQAESRLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTMEREDAIGEGTVFATPNEVLTAYQNGYVHLHTRIGIP
VKEVNKTNFKEKFQEDLLLTSVGKIIFNEILPESFPYMNEPSMENLEKETPEKYFVPSTT
DVKKEFKERDLVSPFKKGFLGDIIAEVFKKFKISETSIMLDKMKDLGFHYSTKAGITIGV
SDIVVLKDKKEILDEADEKVSKVSKQFRRGLITEEERYDKVIEIWSKAKDVIQTKLLGTL
DKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLEVKAIREGSEIIESLY
DRLVGRVSFQKIVHPETNEVIVDRNESISEDTAKVIEDAGIEEVLIRSVFTCDTKHGACK
KCYGRNLATGSNVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEVF
EARNPKGQAVISEIEGKVIDVKEQNDKKEIVVQGAIETRNYPTMYGARLKVKVGEEVKPG
QELTEGSIDPKELLTVSGVHGVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMMRKIRVM
DAGDTNVLPGSLVEIHQFNEANRDILLKNGRPASGRPVLLGITKASLETDSFLSAASFQE
TTRVLTDAAIKGKRDELVGLKENVIIGKLVPAGTGMQRYRQAFPKQGDEVVAPENAVEEV
TAQE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
ttgatagatgtaaataattttgaatatatgaagatcggcttagcatcctcggacaagatt
cgctcttggtcccgtggagaggttaaaaaaccagagacaatcaactatcgtacgttgaag
ccggagaaagacggtctcttctgtgagcgtatcttcggccctacgaaggattgggaatgt
cactgtggtaaatacaagcgcgttcgttataagggcgtagtttgtgacagatgtggagtt
gaagtaacgcgcgcgaaggttcgtcgtgagcgtatggggcacattgagcttgctgcccct
gtctcccacatttggtactttaaaggtattccaagtcgaatgggtcttgttttagacatg
tcaccacgttcacttgaagaggttatttactttgcatcgtatgttgtaacagatgctggt
gatacaccacttgaattaaagcaacttctttcagagaaagagtaccgcgcttatcgcgat
aagtatggccgttctttcactgctgaaatgggagcagaagcaattcgtaagcttttatct
gatattgatcttgagaaggaagctattcaactgaaggaagagctagagacagctcaagga
cagcgtcgtactcgtgcgattaagcgtcttgaggtaatcgaagcattccgtcattctgaa
aacgaaccaagctggatggtactagacgtacttcctgttatcccacctgagcttcgcccg
atggtacagctagatggtggtcgttttgcaacttctgacttaaacgatctatatcgccgt
gttattaaccgtaataaccgtctaaagcgtcttttagatttaggtgcgccaaacattatc
gttcaaaacgagaagcgtatgcttcaagaagctgtcgatgcgttaatcgataacggtcgt
cgcggacgtcctgtaactgggccgggtaaccgtccacttaagtccctttcacacatgtta
aaagggaaacagggtcgtttccgtcaaaaccttcttggtaagcgtgttgactactcagga
cgttcggtaatcgttgtaggacctaacctaaagatgtatcagtgtggtctaccgaaggaa
atggcacttgagctattcaagcctttcgttatgaaggagcttgtaagtcaaggtcttgct
cacaatatcaagagcgcaaagcgtaaagtagagcgtgtgcaccctgaagtatgggatgtt
cttgaagaagtaattcgtgagcacccggttctattaaaccgagcgccaacgcttcacaga
cttggtattcaggcattcgagcctactcttgtagaaggtcgtgcaattaagcttcaccca
ctcgtatgtacagcatataacgctgactttgatggtgaccaaatggctgttcacgttcca
ctatctgcagaggcacaagcggagtctcgtcttcttatgctagcggcacaaaacattctt
aaccctaaggatggtaagccggtagtaacgccttcccaggatatggtactaggtaactac
tacctaacaatggaacgcgaagatgcaattggtgaaggtacggtattcgcaacgcctaac
gaagtgctaacagcttatcaaaacggctatgtgcaccttcacacgcgtatcggtattccg
gttaaagaagtaaacaaaacaaacttcaaggagaaattccaagaagatcttcttcttact
tctgtaggtaagattatctttaacgaaattcttccggagtcattcccttatatgaatgaa
ccttctatggaaaaccttgaaaaggaaacgcctgaaaagtacttcgtcccatctactaca
gatgtgaagaaggaatttaaagagcgtgatcttgtatcaccatttaagaaaggcttcctt
ggagatatcatcgcagaggtatttaagaaatttaagatttctgagacgtctatcatgctt
gataagatgaaggaccttggtttccattactcgacgaaagccggtatcacgattggtgta
tctgacatcgtcgtattaaaggataagaaagagattcttgatgaggctgacgaaaaagtt
tcgaaggtatcgaagcaattccgtcgcggtcttattacagaagaagagcgctatgataaa
gttatcgagatctggagtaaagcgaaagacgttattcagacgaagcttctcggaacactt
gataagcgcaacccgatctttatgatgagtgactctggtgcccgtggtaacgcctctaac
tttacgcagcttgctggtatgcgtggtctgatggcaaacccatctggtcgaatcattgag
cttccgatcaagtcctcgttccgtgagggtctgacggtacttgagtactttatttcgaca
cacggtgcgcgtaaaggtcttgccgatacagcccttaagacggctgactcaggttaccta
actcgtcgtcttgtagacgttgcacaggatgttattatccgtgaggatgactgtggaacg
gaccgtggtttagaagtaaaagcgattcgcgaaggctcggaaatcattgaaagcttatat
gaccgtttagtaggtcgtgtatccttccagaagatcgtccatcctgaaacgaacgaagtc
attgtagatcgtaacgaaagcatttctgaagacacagcgaaggtcattgaagatgcagga
attgaagaagtattaattcgttctgtgttcacatgtgacacgaagcacggtgcttgtaag
aagtgttacggacgtaacttagctactggatctaacgtagaggttggagaggcagttggt
attattgcagcccagtctatcggagagccaggtacacagcttacaatgcgtacgttccac
acaggtggtgtagccggagacgatattacacagggtctacctcgtatccaagaggtattt
gaggctcgtaatccgaagggtcaagctgttatttctgaaatcgaaggtaaggttatcgat
gtgaaagagcagaatgacaagaaggaaatcgtcgttcaaggcgcaattgaaacacgtaac
tacccaactatgtacggtgctcgcctgaaagtgaaggttggagaagaagtgaagcctggt
caagagctaactgaaggttctattgatccgaaggaacttctaactgtatctggtgtacac
ggtgtacaagagtatcttctacgtgaagtacaaaaagtatatcgtatgcaaggggtagaa
atcggcgataagcacgtcgaggtaatggttcgtcaaatgatgcgtaagatccgtgttatg
gacgcgggagatacaaatgtacttccaggatctcttgttgagattcaccagtttaacgag
gctaatagagatattctcctcaagaacggtcgcccagcatctggacgtccagtattactt
ggtattacaaaggcttcacttgaaacggattccttcctatctgcagcatccttccaggag
acgactcgtgtcctaactgatgcagcaattaaagggaagcgagacgaacttgttggtctg
aaggaaaatgttattatcggtaagctcgtacctgctggtacaggtatgcagcgctatcgt
caagcatttcctaagcagggtgacgaggtagttgcaccagagaatgcagttgaagaagta
acagcacaagaataa
DBGET
integrated database retrieval system
