Paenalkalicoccus suaedae: FLK61_29580
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Entry
FLK61_29580 CDS
T08127
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
psua
Paenalkalicoccus suaedae
Brite
KEGG Orthology (KO) [BR:
psua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psua03019
]
FLK61_29580
03009 Ribosome biogenesis [BR:
psua03009
]
FLK61_29580
Enzymes [BR:
psua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FLK61_29580
Messenger RNA biogenesis [BR:
psua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FLK61_29580
Ribosome biogenesis [BR:
psua03009
]
Prokaryotic type
rRNA helicases
FLK61_29580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
SNF2-rel_dom
LSDAT_prok
ACT
CMS1
ACT_9
Motif
Other DBs
NCBI-ProteinID:
QKS70880
UniProt:
A0A859FD94
LinkDB
All DBs
Position
1446907..1448199
Genome browser
AA seq
430 aa
AA seq
DB search
MHNFERFNLQPFLIEGLVRDNIEQPTEIQERLLPSIKRGADVIGKSQTGTGKTLAFLLPI
LHNVNQEEASTQYVVTAPTRELATQLFEVFKHYANDQISVQLVVGGTDRLRMVEKVRQQK
PHIVIGTPGRILDMIREQALLPAYVKGFVVDEADQMLDMGFLEEVDSIASAMNEELQLMV
FSATIPERLMPFLKKYMKNPKQIEVQPRTAAPKKMEHWLINDRDRSRKELIQQVTERINP
FLAIVFTNTKESANEVFQVLQSQGLNVDMIHGGVEPRKRKKVLKKLQDAEIQYLVATDLI
ARGIDIKGISHIINYEIPTELEYYVHRVGRTARAGWDGLAMTIFGREDERKIEKLKQQGI
NFVYKEWKNGAWETVEKRVFQRKSKVSEAELKKAIPRKPKKVKPGYKKKARQEAERKQQR
ERRINRRKTK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
ttgcataattttgaacgttttaacttacagccgtttcttattgaaggattggttcgtgac
aacattgaacagcctacagaaattcaagaaagattattaccatcgattaagcgaggcgcc
gatgtaatcggtaaatctcaaacaggaacaggtaaaacattagcgtttttacttcctatt
ttacacaacgtaaatcaagaggaagcatcgacacaatatgttgttactgctccaacacga
gagcttgcaacacagctttttgaggtctttaaacactatgcaaatgatcagattagtgtg
cagcttgttgttggtggtaccgatcgcctaagaatggtcgagaaggttagacaacaaaag
cctcacattgtcattggaacaccaggacgaattttagatatgattcgtgagcaggcatta
cttccagcttatgtgaaaggatttgttgtggacgaagctgaccaaatgctcgacatggga
tttttagaagaagtagatagtattgcttccgctatgaacgaagagcttcagcttatggtc
ttctcggcaaccattcctgaaagacttatgccattccttaaaaagtatatgaagaacccg
aagcaaatagaagtacaacctcgaactgcagctccaaaaaagatggagcattggttaatt
aatgaccgcgacagaagtcgtaaagagcttattcaacaagtaacagaacgaattaatccg
ttccttgcaatagtatttacgaatacgaaagaatctgcgaatgaagttttccaagtgcta
caaagccaaggattaaatgtagatatgattcacggtggcgtggagcctcgtaaacgtaaa
aaggtacttaaaaagttgcaggacgcagaaattcaatatctagttgcaacagatttaatt
gcacgaggcattgatattaaaggaatcagccatattattaactatgaaatcccaacggag
ctagaatattatgtacaccgtgttggtcgaactgccagagcaggttgggatggtctagcg
atgacgatcttcggccgtgaagacgagcgcaagattgagaagcttaaacaacagggcatc
aactttgtctataaagaatggaaaaacggagcttgggaaacagtagagaagcgtgttttc
caacgaaagtcaaaagtatcagaagctgagcttaagaaagcgatcccaagaaaacctaaa
aaggttaaaccaggatataaaaagaaggctcgtcaagaagcggagcgtaagcaacagcgt
gaaagacgaattaatcgccgaaaaacgaagtaa
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