Paenalkalicoccus suaedae: FLK61_30555
Help
Entry
FLK61_30555 CDS
T08127
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psua
Paenalkalicoccus suaedae
Pathway
psua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FLK61_30555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psua03019
]
FLK61_30555
03400 DNA repair and recombination proteins [BR:
psua03400
]
FLK61_30555
Enzymes [BR:
psua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FLK61_30555
Messenger RNA biogenesis [BR:
psua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FLK61_30555
DNA repair and recombination proteins [BR:
psua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FLK61_30555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QKS71059
UniProt:
A0A859FCV1
LinkDB
All DBs
Position
1627273..1628781
Genome browser
AA seq
502 aa
AA seq
DB search
MHLENELQKLQLTSFRPGQKEIIESVLGRVHTIGVLPTGSGKTLCYQLPTRMMLGLTLVV
SPLLSLMEDQVIQLRLAGEKRVAHLSGLLSYNEKKAILSQVNNLSMLFVSPEMLASGELL
QKLQHCDVSLVVIDEAHCISQWGHEFRTEYLRLPTYINKLGSPTVLALTATATKNVIDDI
RAKLDLDNAKLIQHSVNRPNIFLRSHIIESEQQRQQVLLGELEHCQLPAIVYVSTRKDAQ
KVSELLQANEFYTAYYHAGLSREDRSLVQSQFLDGDLQILVATTAFGMGVNKRDIRTVIH
LHLPQSVESYVQEIGRAGRDSLQSEAIAIISTEDKQLPLTMIDYELPTEEWLLGFARACH
GLSFEEAKHASQLEETMWRMLAYYFNKQGLIINQQFQTVGKEDKIRDLAQHFLKRRLFKQ
RQLYQVEELMTSSTCTRKQIIEFFGESTFEKPAFCCDRCQQTRPLMDQPITRRKRDEVNW
QTRLHKLLYPVKDTPSCKSNLK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgcatttagagaatgagcttcaaaaactgcagttaacctcctttagaccaggtcaaaaa
gaaataatagaatccgttttaggtcgtgttcatacgataggagttttaccaacaggtagt
gggaaaacactttgctatcagctaccaacgcgaatgatgctaggtcttacccttgtcgtt
tcgccacttctttctctgatggaggatcaagtcattcaactacgactagctggtgaaaaa
agagtggcccatttatctggtctcctatcatataacgagaaaaaagcgatactttcacaa
gtaaataatttgtctatgttgtttgtatctcctgaaatgttagcgtcaggagagctttta
caaaaattgcaacattgcgatgtgtcccttgttgtcattgatgaagctcactgtatttct
cagtgggggcatgagttccgaacggagtatttacgcctaccgacatatataaacaagtta
ggttctccaacggttcttgcgttgactgctacggcgaccaaaaatgtaatagacgatata
cgagctaagctagatttggataacgctaaactgatccaacactctgtgaatcgaccaaat
atttttttacgatcacatatcattgaatctgagcaacagcgacagcaagtgttattaggt
gagctcgagcattgtcagcttcctgctatcgtttacgtgtcgactagaaaagatgctcag
aaggtgtcagagctcttgcaagcgaatgaattttatacagcctattaccacgcaggcctt
tctcgcgaggatcgttcccttgtacaatcacagtttttagatggagacttgcaaattctt
gtagccacaacggcgtttggaatgggcgtgaataaacgtgatatccgaactgttattcat
ttacatttacctcagtccgtggaaagctacgtgcaagagattgggcgggctggaagagac
agtttacaaagcgaagctatcgctattattagtacagaagacaagcaattgcctctaaca
atgatcgattatgaattaccaacagaggagtggttactaggctttgctagagcatgtcat
gggctgtcttttgaagaagcaaagcatgcctcacaattagaagagacgatgtggcgcatg
ctcgcgtattatttcaataaacaagggttgattataaatcaacagttccaaacagttggt
aaagaagataagattcgagatttagcgcaacatttcttaaagaggcgattatttaaacag
aggcaactctatcaagtcgaggaattaatgacgagctccacgtgtacaagaaagcaaatt
attgaattctttggggagtctacgtttgagaagccagcattttgctgtgatcgatgtcaa
caaacacgtccattaatggatcaacccattactcgacgaaaaagagacgaggtcaactgg
caaacacgacttcataaacttttatatccagtaaaggatacaccatcatgcaaaagcaat
ctgaaatag
DBGET
integrated database retrieval system
