Paenalkalicoccus suaedae: FLK61_32225
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Entry
FLK61_32225 CDS
T08127
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
psua
Paenalkalicoccus suaedae
Pathway
psua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FLK61_32225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psua03019
]
FLK61_32225
03009 Ribosome biogenesis [BR:
psua03009
]
FLK61_32225
Enzymes [BR:
psua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FLK61_32225
Messenger RNA biogenesis [BR:
psua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FLK61_32225
Ribosome biogenesis [BR:
psua03009
]
Prokaryotic type
rRNA helicases
FLK61_32225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Helicase_RecD
AAA_30
YpjP
Motif
Other DBs
NCBI-ProteinID:
QKS71369
UniProt:
A0A859FDU1
LinkDB
All DBs
Position
complement(1968451..1970040)
Genome browser
AA seq
529 aa
AA seq
DB search
MTITFEDFAISANLKKAIKDIGFEAPSPIQEKVIPVILDSNDLIGQAQTGTGKTAAFGIP
TIEKVSSKSKSVQALILTPTRELAIQVAAELQRLSKFNKVQTLPVYGGQSIGHQIKALKR
GVQIVVGTPGRILDHIERKTLKLDQLKMLVLDEADEMLDMGFVEDIEKILQKANPERQTL
LFSATMPPAIRKLSNKYMTEPKQVTIAKGDVSAPSIEQVYYKVLDKNKQDSLCRVIDSED
INLGIIFCRTKKGVAELTEALQARGYQADGLHGDLTQSQRDQVMRKFRKSAIEFLIATDV
AARGIDVNDVSHVINYDIPQDPESYVHRIGRTGRAGREGIAMTLVTPREMKHLRSIESEI
KKKVPSRNLPSIEEVVEKQQKVWKTQIEKNIDVNDKLDSVYDELVTDLLNEYSAEKIVSS
LLRIAFYSHEDEKKEKHDFGETGAQSGMTRFFINVGKNVNLTPKRLSEDVAKIIGINPKS
VGRIDIFDSFTFMEVPEEVAPFVYEGLKHARVAGAKINLEPAKPRGKRR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgacaattacgtttgaagatttcgcgatttccgcgaatttgaaaaaagcaattaaagat
atcggatttgaggcgccgtcgccaattcaagagaaagttattcctgtaattttagattct
aacgatctaatcggtcaggctcaaacaggaactggtaaaactgcagccttcggaatccca
acgattgaaaaagtatcgtcaaaatccaagagtgtgcaagctcttattttaacgccaaca
cgagagctagctatccaagtagcagctgagttacagcgtttatctaaatttaacaaagta
caaacattacctgtatatggtggacaatcaattggacatcaaatcaaagcattaaagcgc
ggcgttcaaatcgttgttggtacgccaggacgtatcctcgaccacatcgagcgaaaaacg
ctaaagcttgatcagcttaaaatgcttgttttagatgaagctgatgagatgctagacatg
ggctttgtggaagatatcgaaaaaattcttcaaaaagcaaacccagagcgtcaaacactt
ttattctcagctacaatgccaccggcaatccgtaagctgtctaataaatatatgacagag
cctaagcaagtaacaattgctaaaggtgatgtttcagctccttctatcgagcaggtttac
tacaaagtattagataaaaacaagcaagactctctatgtcgtgtaatcgacagtgaagat
atcaatttaggtattattttctgtcgtacgaaaaaaggagtggcggagcttacggaagcc
cttcaagcacgcggctaccaagctgatggtttacacggagacttaactcagtcacagcgt
gaccaagttatgcgtaaattccgtaagtctgcaattgagttcttaattgcaacagacgta
gcagctcgtggaatcgatgttaatgacgtaagtcacgttatcaactacgacatccctcaa
gatcctgaaagctacgttcaccgaattggacgtacaggacgtgctggacgcgaaggtatc
gcaatgacgcttgtaactccaagagaaatgaagcaccttcgttctatcgagtctgaaatc
aagaagaaagtaccttcacgtaaccttccttctattgaagaggttgtagaaaagcaacag
aaagtttggaagacgcaaattgagaaaaatatcgatgtaaacgataaacttgatagtgtc
tacgatgagcttgtgacggacttactaaacgaatactctgctgaaaaaattgtttcttcc
cttcttcgtattgcgttctatagccatgaagatgagaagaaagaaaagcatgatttcggt
gaaacaggcgctcaaagcggaatgactcgcttctttatcaatgtaggtaaaaatgtgaac
ttaacacctaaaagactttctgaagacgttgctaaaattatcggcattaatccgaagtca
gttggacgtatcgatatcttcgatagctttacgtttatggaagttcctgaagaagtggct
ccattcgtctatgaaggccttaaacacgctcgtgttgcaggagctaaaattaatcttgaa
ccagctaagccacgtgggaagagaagataa
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