Pelolinea submarina: Pelsub_P0027
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Entry
Pelsub_P0027 CDS
T05783
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psub
Pelolinea submarina
Pathway
psub03030
DNA replication
psub03430
Mismatch repair
psub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pelsub_P0027
03430 Mismatch repair
Pelsub_P0027
03440 Homologous recombination
Pelsub_P0027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psub03032
]
Pelsub_P0027
03400 DNA repair and recombination proteins [BR:
psub03400
]
Pelsub_P0027
Enzymes [BR:
psub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pelsub_P0027
DNA replication proteins [BR:
psub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pelsub_P0027
DNA repair and recombination proteins [BR:
psub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pelsub_P0027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BBB46800
LinkDB
All DBs
Position
complement(27077..30904)
Genome browser
AA seq
1275 aa
AA seq
DB search
MSFVHLHVHTHYSLLDGFSNIKKLMTRAKEYGMPAVTISDHGTMYGVIEFYNAAKAAEIK
PIIGLESYLAPRGMTDKDSQYDKRAFHLLLLAENNTGYQNLLKIASAAQLDGFYYHPRID
KDYLAAHSEGLIATSACLKGEVPNTIMERGVETAQPLLDWYFDVFGRDRFFLELQRHDMP
ELEQVNQELLKMGARYNARYVATNDVHYVDRSDARYQDILLAIQTGALLSDPHRMHMNGD
SYYFRSPEEMSALFSDVPESITNTLEIADRCNVNLDPDGYHLPLFEVPEGFTAQTYLRKL
CDEGLKERYHEHADDKDVLERLEYELGVIHKMGFDAYFLIVWDLSRYARDHNIWYEARGS
AAGSIVAYSLGITSVEPLRHGLIFERFLNPDRVNMPDVDMDFQDDKRTEIMEYCADKYGH
DHVAQIITFGTMGARNAIRDVGRVMDIPLNEVDQIAKMIPNVPSRPTSIPEAIEQVPSLK
ELYNSQPYLKDLIDAAAGMEGVARNVGTHAAGVIISDKPIVEYVPLHRPTSNSEDVPIKS
VTQYEMTILDHLGMLKVDFLGLSTLTVMQKASDLIFKRHNVRYTLDNIPVDDAETYEFLG
KGLTAGVFQLEGVGMTRFLVEMKPTKLDNIIAMVALYRPGPMDTIPSYIKRMHGEEEITY
RHPLLEPIMGETYGFAIYQEQVMQAAMGLAGYTAAEADMLRKVISKKKEKELKKHHEKFV
NGAVERGIDKKTADEIFVDWEGFAHYGFNKSHAADYGVVSVQTAFLKTHYAIEYMTALLS
QVKNESEKVALYVADCRAMGIDVLPPDVNYSGWDFEIEDTGDGQSVIRFGLGAVKNVGQN
PIDLITEARADGGKFKDINDFARRVDLRKVGRRALESMIRVGALDTFADRHALLSGLENV
MAVSESHFKAREAGQMTIFGFVEGLDEEIHLPAVTSLDRREKLEWEHELLGIYLSDHPLS
PYMTYIRKRVTHFSAQLKEARHGSEVVVAGKIAGYRTIITKKGSEMAFATLEDLQGSIEL
VIFPRTWSQYAEVIRGEGALLVKGKADTEKIDPKVLVDYLEEIPPDQGNDPEDDPMDALP
VQGQSPRLDDYDLPPLDDDDDAFFGGLDIAEDGPVFSGDTTDRAANTRSFSAGRSTEVAL
QAPAAPLASITAAMAPVVSYVAESEVGQEVPGETSPRVSDASSGAEPESISPNGNHKVLL
LQLASCGSRERDNRRLKQIYGFLTSTPGSDQFAFLCQENGQTVRLDFPNDNTCINDSMLR
EVRGIVGEANVIIEE
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
ttgtccttcgttcaccttcacgttcacacacattattccctgcttgatggtttcagcaac
atcaagaaattgatgacacgtgcgaaggaatacggtatgccggcggtgacgatttcagac
cacggcaccatgtacggcgtgattgaattttataatgccgccaaagctgccgagattaaa
cctattatcggattggagagttatctggctccccgcggtatgacggacaaagattcccaa
tatgacaaacgcgcgtttcatttgctgctgctggcggaaaacaacaccggttatcaaaac
ctgttgaaaattgccagcgctgcgcagttggacggcttttattaccatccccgcattgac
aaagactatctggcggcgcattccgaaggcttgatcgccacctcggcctgcctcaaaggc
gaggtgcccaacaccatcatggagcgcggtgtggaaaccgcccagcccttgctggactgg
tattttgacgtttttggacgcgaccgctttttcctggaattgcagcgccacgatatgcct
gaattggagcaggttaatcaggaattgctcaagatgggcgcgagatataacgcccgctac
gtggctaccaacgatgtccattatgtagaccgctcggacgcccgctaccaggatattctg
ctggctatccagaccggcgcgctgctttcagacccccaccgcatgcacatgaatggcgac
agctactacttccgttcgccggaagagatgagtgcgctgttcagcgacgtgcccgaatcc
attaccaacacgctggaaatcgccgaccgctgtaacgtcaacctggatccggatggttat
cacctgcccttgttcgaagtacccgagggtttcaccgcgcaaacttacttgcgcaagttg
tgcgatgaaggcttaaaagagcgttaccacgaacacgcggatgataaggatgtgctggag
cggttggaatacgagctgggcgtaatccacaagatgggtttcgatgcctacttcctgatc
gtatgggacctcagccggtacgcacgcgaccacaatatctggtatgaagcacgcggttcc
gcggccggttcgattgtggcctattcactggggattacttcggtggaaccgctgcgccac
ggcctgatcttcgaacgcttcctcaacccggatcgcgtcaacatgccggatgtggatatg
gactttcaggatgacaagcgtaccgagattatggaatactgtgctgataaatacggtcac
gaccatgtggcccaaatcatcacctttggcaccatgggcgcgcgcaacgccatccgcgat
gtcggccgggtaatggacattcccctgaatgaggtggatcagattgccaagatgatcccc
aatgttcccagccgcccgacttctattcctgaagcaattgaacaagtgccttctctgaag
gaactgtataacagccagccatatctgaaagacctgatcgatgcggcggccggtatggaa
ggtgtggcccgcaatgtgggtacgcacgctgccggcgtcatcatttccgacaaacccatc
gtggaatacgttccgctgcaccgccccacttccaactcggaagatgtgccgattaaatca
gtcacccaatatgaaatgaccatcctggatcatctgggcatgctcaaagtggatttcctg
ggcctttccactctgaccgtgatgcagaaggccagcgatttgattttcaagcgccataat
gtgcgctatacgctcgataatattccggtggatgacgccgaaacctatgaattcctgggt
aaaggcctcactgccggtgtgttccaactggaaggcgtgggcatgacccgttttctggtg
gagatgaaacccaccaagctggacaacattatcgccatggtggcgctttatcgccccggg
cctatggataccattccctcttacatcaaacgcatgcacggcgaggaagaaatcacctac
cgccacccgctgctggaacccattatgggcgagacctacggctttgccatctaccaggag
caggttatgcaggctgccatggggctggcgggctacaccgccgccgaggcggatatgctg
cgcaaggtcatctccaagaagaaggaaaaagagctaaagaaacaccacgaaaaattcgtc
aatggcgcggttgaacgcggcattgataagaaaacggcggatgagatttttgtggattgg
gagggttttgcgcattacggcttcaataagagccacgcggcggattatggggtcgtgtct
gtgcaaaccgctttcctgaaaacacactatgccattgagtatatgaccgcgctgttgtcg
caggtcaaaaacgaatccgaaaaagtcgcgctttatgtggccgactgccgcgccatgggc
atcgatgttctgccgccggacgtgaattacagcggttgggattttgaaattgaagacacc
ggggatgggcaatccgttattcgtttcggtctgggcgctgtcaagaacgtcggccagaac
ccgatcgatttgatcaccgaagcccgcgcggacggtgggaagttcaaggacatcaatgac
tttgcccgccgtgtagaccttcgtaaggtgggccggcgtgcgctggaatccatgatccga
gtgggtgcgctggatacctttgccgacaggcatgccctgctcagcggcctggaaaatgtc
atggcggtcagtgagagccatttcaaggcgcgcgaggccggacagatgaccatttttggc
tttgtggaaggcctggacgaagaaattcacctgcctgctgtgacttccctggatcgccgt
gaaaagcttgaatgggaacatgaactgctgggcatttacctgtcagaccatccgctttcc
ccttatatgacctatatccgcaagcgtgtcacgcatttcagcgcccaactgaaagaagcc
aggcacggcagcgaagtggttgtagccggcaagattgcaggctaccgcaccattattacc
aaaaaaggatctgaaatggccttcgctaccctggaagatctgcagggcagtattgaattg
gttatcttcccgcgcacctggtcgcaatacgccgaggtgatccgtggtgagggtgcgctg
ctggtcaagggcaaggcggacactgagaagatcgatcccaaggtgctggtggattacttg
gaagagatccccccggatcagggtaacgatccggaagacgatccgatggatgctttgccg
gtgcagggtcaaagcccgaggttggatgattacgatctgcctccgttggatgacgacgac
gatgctttctttggcgggttggatattgccgaagatgggccggtgttttccggcgacacg
accgatcgcgcagctaacacacgcagcttcagcgcggggcgcagcaccgaagtggcttta
caagcgcctgcggctcctttagcaagcattacggctgccatggcaccggtggtgtcctat
gtcgcagaaagcgaagttgggcaggaagtgccgggtgaaacgtctccccgggtttccgat
gcctcatccggagcggagccggaaagtatctcgccgaatggcaatcataaagtgctcctg
ctgcagctggcaagctgcggttcgcgcgaacgcgacaaccgccgtctgaagcagatttac
ggattcctcacctccacacccggcagcgaccaatttgccttcctgtgccaggaaaacgga
caaacagtgcgcctggactttcccaatgacaatacttgcatcaacgatagcatgctgcgc
gaggttcgcggaattgtaggggaagctaacgtcatcattgaagaatga
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