Pelolinea submarina: Pelsub_P0098
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Entry
Pelsub_P0098 CDS
T05783
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
psub
Pelolinea submarina
Pathway
psub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pelsub_P0098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psub03400
]
Pelsub_P0098
Enzymes [BR:
psub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pelsub_P0098
DNA repair and recombination proteins [BR:
psub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pelsub_P0098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
PriA_CRR
Helicase_C
RUBY_RBDX
zinc-ribbons_6
Trm112p
Helicase_C_2
AAA_22
AAA_34
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
BBB46871
LinkDB
All DBs
Position
complement(109334..111820)
Genome browser
AA seq
828 aa
AA seq
DB search
MLGFAQVAVNVPGVQDHFDYRIPEQLIGTLDSGWLVEVPFGSQMVQAIVLRLKAASDILE
TRLIENVLEDAPVVTAQQITLAEWLSEHYFYPLSSYLFAMLPPGLGQRADTLYRINPVIP
QADQPLSPLQRRILAQLTEKGPLRGRQLDTAFRQVDWRASARTLVRKGYLNTQAVLPGPA
VSSKHIRAVRALVNPQELEDRHDLLGRPDSAAYERRLAAMRVLVNEPQEMDVSWVYASSG
ANASDLRYLEKQGLVSFGEQQVWRNPLADRETAADIVPQLTADQASVWKALSQLMQSGSY
AKPVLLKGVTGSGKTELYLRAIDACLRAGRQALVLVPEISMTPQTIERFVARFPGRVGVV
HSKLSSGERYDTWQRARTADFSIAIGPRSALFTPFPNIGVIVVDECHDDSFYQTEMGPYY
HAVQAAAELGRLSNAQVIFGSATPTVTMAFRAQHENWPKLELPRRVLAHRQTTAGKAVKP
AVHVDSLPLPKVDVVDMRTELKQGNTAIFSRALQQELGEVLDAGQQAILLLNRRGSASYV
FCRDCGHSLRCPRCDFPLTFHRTSTGLVCHTCGYTRKMPQKCPNCGSGKIKQFGLGTEKV
ETELQRAFPSARLLRWDADTAKGKDSQDIILSHFRQHNADILIGTQMLAKGLDLPLVTLV
GVVLADVGLNFPDYRTAERAFQLLTQVAGRAGRSALGGRVLVQTFQPEHYAIRFAAQHDF
TGFYAYELEQRRRLSYPPFVRMLRFEARERDNDTAREKAQGLAGRLRALMQRSDDRTLNL
TGPLPPYFARQNGQYRWQLILKGMRPETLLQGQDFSGFIVEVDPPSLL
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
ttgcttggttttgctcaagttgccgtaaatgtacccggtgtgcaggatcatttcgattac
cgcatcccggaacaattgatcggcacgctggatagcggttggttggtggaggtacccttc
ggcagccagatggtgcaggctatcgttctgcggctcaaagctgccagtgacattcttgaa
acacgtttgattgagaacgtgctggaagacgcgccggtggtgactgcgcagcagattacc
ctggcggaatggctcagcgagcattacttctatccgttatcttcctatttgtttgccatg
ctgccgcctggtttggggcagcgggccgacacactgtaccgtatcaacccggttattccc
caggcggatcaaccgctgtctcccctgcagcgccgtattctggcgcagttaacggaaaaa
ggaccgctgcgcgggcgtcaattggacacggcttttcgccaggtggattggcgcgcctcc
gcgcgcaccctggtccgaaaggggtacctcaacacacaggcagtcctgcccggcccagcc
gtcagcagcaaacacatccgcgctgtacgcgcgctggtcaacccgcaggaactggaagac
cggcatgatcttttaggccgaccggactctgccgcttacgaacgccggttggcggccatg
cgcgtgctggtgaatgaaccgcaggaaatggacgtttcctgggtatacgcttccagcggt
gccaacgcgtccgacctgcgctacctggaaaaacagggactggtatcattcggcgaacag
caggtctggcgcaatcccctggcagacagagaaaccgcagcggatatcgtcccacagctc
accgccgaccaggcaagcgtctggaaagcgctcagccagcttatgcaatccggctcatac
gcaaagccagtgctgctgaagggcgtaaccggttcgggcaagactgaactgtacctgcgc
gccatcgatgcctgtctgcgggccggccgccaggcgctggtgctggtgccggagatatcc
atgactcctcaaaccatcgagcgtttcgtggcgcgttttcccggaagagtgggcgtggtg
cattccaaactgtccagcggagaacgttacgatacctggcagcgggcgcgcacggcggat
ttctccattgccatcggcccgcgcagcgcactgttcacgccttttccgaatataggtgtc
atagtggtggatgaatgccacgatgactctttctaccagacagagatgggcccctattat
catgccgtacaggccgcggctgaattggggcgattatccaacgcgcaggtcatatttggc
agcgccacgcccacggtaaccatggcttttcgcgcgcagcatgagaattggcccaaactg
gaactgcctcgccgggtgttggcgcaccgccaaacgacggcgggcaaggcggtaaagcct
gccgtgcatgtagattcattgcctttgcccaaggtggacgtggtggatatgcgtacggaa
ttgaaacagggcaacactgccattttcagccgcgctttgcagcaggagctgggtgaggtg
ttggatgccgggcagcaagccatcttattgctgaaccggcgcggcagcgccagttacgtt
ttctgccgcgactgcggacacagcctgcgctgcccgcgctgcgattttccgctgaccttc
caccgcacatccaccgggttggtttgccacacctgcgggtatacgcgtaaaatgccccaa
aaatgcccgaattgtggaagcggaaagattaaacaatttgggctgggcaccgaaaaagta
gaaacggaactccagcgcgctttcccgtccgcacgcctgctgcgctgggacgcggatacc
gccaaaggcaaagattcacaggacatcatcctgtcccatttccgccagcacaatgccgat
attctgatcggcacgcaaatgctggccaagggcctggacctgccgctggtgacgttggtg
ggggtggtgctggccgatgtcggccttaacttcccggattaccgcacagccgaacgcgct
ttccagctgttgacccaggtggccgggcgcgctggacgcagcgcgctgggcgggcgcgtg
ctggtgcagaccttccaacctgagcattacgccatccgttttgccgcccagcacgacttt
accgggttttacgcctacgagctggaacagcgccgccgtttgagctacccgcctttcgtg
cgcatgctgcgcttcgaggcccgcgagcgcgataacgacactgcccgcgaaaaagcccag
gggttggccggacgcttgcgcgccctgatgcagcgcagcgacgaccgcacgctcaacctg
accggcccgctgccgccctactttgcccgccagaacgggcaataccgttggcagctgatc
ctgaaaggtatgcggcccgaaacactcctgcagggtcaggatttctccggtttcattgtg
gaagtcgacccgccgagccttctttag
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